RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 GSDMBQ8TAX9 411 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 FBXO25Q8TCJ0 367 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 LKAAEAR1Q8TD35 194 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 PYROXD1Q8WU10 500 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 CFAP36Q96G28 342 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 CCDC74BQ96LY2 380 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 CMKLR1Q99788 373 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 FAM129AQ9BZQ8 928 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 CCDC68Q9H2F9 335 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 TRIT1Q9H3H1 467 aaKnown RBP11.52□□□□□ -0.57
HSPG2-206ENST00000439717 CCDC86Q9H6F5 360 aaKnown RBP11.52□□□□□ -0.57
HSPG2-206ENST00000439717 PLAC1Q9HBJ0 212 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 FBXO6Q9NRD1 293 aaPredicted RBP11.52□□□□□ -0.57
HSPG2-206ENST00000439717 OGFRQ9NZT2 677 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 EPHA6Q9UF33 1036 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 POLG2Q9UHN1 485 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 SATB2Q9UPW6 733 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 AK5Q9Y6K8 562 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 MN1Q10571 1320 aaPredicted RBP11.52□□□□□ -0.57
HSPG2-206ENST00000439717 E5RI56 91 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 PLD2O14939 933 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 TOX3O15405 576 aaPredicted RBP11.51□□□□□ -0.57
HSPG2-206ENST00000439717 KDM1AO60341 852 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 NIPSNAP2O75323 286 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 DXOO77932 396 aaKnown RBP11.51□□□□□ -0.57
HSPG2-206ENST00000439717 HAUS5O94927 633 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 C9P02748 559 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 CAPNS1P04632 268 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 RPN2P04844 631 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 GSTA2P09210 222 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 CHRM3P20309 590 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 ATP5DP30049 168 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 CARSP49589 748 aaKnown RBP11.51□□□□□ -0.57
HSPG2-206ENST00000439717 MPP1Q00013 466 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 GUCY2DQ02846 1103 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 FASTKD3Q14CZ7 662 aaKnown RBP11.51□□□□□ -0.57
HSPG2-206ENST00000439717 C3orf38Q5JPI3 329 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 TEDDM1Q5T9Z0 273 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 UNC5DQ6UXZ4 953 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 RAB11FIP2Q7L804 512 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 PALM2Q8IXS6 379 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 FBXO39Q8N4B4 442 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 KDF1Q8NAX2 398 aaPredicted RBP11.51□□□□□ -0.57
HSPG2-206ENST00000439717 NOA1Q8NC60 698 aaKnown RBP11.51□□□□□ -0.57
HSPG2-206ENST00000439717 OR5K2Q8NHB8 316 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 KCNJ9Q92806 393 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 ZDHHC12Q96GR4 267 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 TFB2MQ9H5Q4 396 aaKnown RBP11.51□□□□□ -0.57
HSPG2-206ENST00000439717 SAYSD1Q9NPB0 183 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 PPANQ9NQ55 473 aaKnown RBP11.51□□□□□ -0.57
HSPG2-206ENST00000439717 FAM114A2Q9NRY5 505 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 MOCS1Q9NZB8 636 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 TMEM9Q9P0T7 183 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 ASF1AQ9Y294 204 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 LOXL2Q9Y4K0 774 aa11.51□□□□□ -0.57
HSPG2-206ENST00000439717 PIKFYVEQ9Y2I7 2098 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 A0A1W2PNU3 283 aaPredicted RBP11.5□□□□□ -0.57
HSPG2-206ENST00000439717 OR5K3A6NET4 321 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 MATN2O00339 956 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 CAPN5O15484 640 aaPredicted RBP11.5□□□□□ -0.57
HSPG2-206ENST00000439717 AHSGP02765 367 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 MPOP05164 745 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 ANKRD34CP0C6C1 535 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 CSTF2P33240 577 aaKnown RBP eCLIP11.5□□□□□ -0.57
HSPG2-206ENST00000439717 CSE1LP55060 971 aaKnown RBP11.5□□□□□ -0.57
HSPG2-206ENST00000439717 CYP4F3Q08477 520 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 MGAT5Q09328 741 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 ILF2Q12905 390 aaKnown RBP11.5□□□□□ -0.57
HSPG2-206ENST00000439717 GBX1Q14549 363 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 TRADDQ15628 312 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 TTLL9Q3SXZ7 439 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 ZNF549Q6P9A3 640 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 TRMT10BQ6PF06 316 aaKnown RBP11.5□□□□□ -0.57
HSPG2-206ENST00000439717 CNSTQ6PJW8 725 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 CEP128Q6ZU80 1094 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 CYS1Q717R9 158 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 ARHGAP22Q7Z5H3 698 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 SLC26A11Q86WA9 606 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 OOSP2Q86WS3 158 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 VRK3Q8IV63 474 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 ZBTB2Q8N680 514 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 AGBL5Q8NDL9 886 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 PHC3Q8NDX5 983 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 OR52E1Q8NGJ3 308 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 LCN9Q8WX39 176 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 ZCCHC14Q8WYQ9 949 aaKnown RBP11.5□□□□□ -0.57
HSPG2-206ENST00000439717 RSC1A1Q92681 617 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 PRR11Q96HE9 360 aaPredicted RBP11.5□□□□□ -0.57
HSPG2-206ENST00000439717 C9orf72Q96LT7 481 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 ZNF578Q96N58 590 aaPredicted RBP11.5□□□□□ -0.57
HSPG2-206ENST00000439717 SLC46A1Q96NT5 459 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 CNTNAP3BQ96NU0 1288 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 AARSD1Q9BTE6 412 aaKnown RBP11.5□□□□□ -0.57
HSPG2-206ENST00000439717 CNTNAP3Q9BZ76 1288 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 TSPYL1Q9H0U9 437 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 HRASLS2Q9NWW9 162 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 NSMCE4AQ9NXX6 385 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 CORO1CQ9ULV4 474 aaPredicted RBP11.5□□□□□ -0.57
HSPG2-206ENST00000439717 AKAP13Q12802 2813 aa11.5□□□□□ -0.57
HSPG2-206ENST00000439717 ESYT3A0FGR9 886 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms