RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 TAS2R38P59533 333 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 SEC61BP60468 96 aaKnown RBP3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 MRPS5P82675 430 aaKnown RBP3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 MRPS34P82930 218 aaKnown RBP3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 ZBED6P86452 979 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 PPP2R2BQ00005 443 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 LRMPQ12912 555 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 ACVR2BQ13705 512 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 DLG2Q15700 870 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 KRTAP27-1Q3LI81 207 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 ACCSLQ4AC99 568 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 NSUN5P2Q63ZY6 315 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 PMS2CLQ68D20 193 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 MARK2Q7KZI7 788 aaKnown RBP3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 HIST3H2AQ7L7L0 130 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 AACSQ86V21 672 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 RNF168Q8IYW5 571 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 LMNTD1Q8N9Z9 388 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 ACVR1CQ8NER5 493 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 OR1J2Q8NGS2 313 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 GSDMBQ8TAX9 411 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 SECTM1Q8WVN6 248 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 JAKMIP2Q96AA8 810 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 TMEM19Q96HH6 336 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 FEM1CQ96JP0 617 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 NUDCD1Q96RS6 583 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 HRH4Q9H3N8 390 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 PDE7BQ9NP56 450 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 PAG1Q9NWQ8 432 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 SUCLA2Q9P2R7 463 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 STK39Q9UEW8 545 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 FBXW11Q9UKB1 542 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 PADI3Q9ULW8 664 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 VDAC3Q9Y277 283 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 TMEM5Q9Y2B1 443 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 PTRH2Q9Y3E5 179 aaKnown RBP3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 RABGAP1Q9Y3P9 1069 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 CMAHPQ9Y471 501 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 TTC28Q96AY4 2481 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 ROCK1Q13464 1354 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 VCANP13611 3396 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 MKI67P46013 3256 aaKnown RBP3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 KIAA0100Q14667 2235 aaKnown RBP3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 ZNF609O15014 1411 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 NFAT5O94916 1531 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 MON2Q7Z3U7 1717 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 PRR23AA6NEV1 266 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 LILRA5A6NI73 299 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 EIF4E1BA6NMX2 242 aaKnown RBP3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 NTN3O00634 580 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 HS3ST1O14792 307 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 FIBPO43427 364 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 AKR1B1P15121 316 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 RRM1P23921 792 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 EIF2DP41214 584 aaKnown RBP3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 SLC15A1P46059 708 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 CRKLP46109 303 aaKnown RBP3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 AMPHP49418 695 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 GMPSP49915 693 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 SUOXP51687 545 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 CLCNKAP51800 687 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 PDE1BQ01064 536 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 SP3Q02447 781 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 SLC20A2Q08357 652 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 STK4Q13043 487 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 MAD2L1Q13257 205 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 RBBP5Q15291 538 aaKnown RBP3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 CCDC96Q2M329 555 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 IGSF11Q5DX21 431 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 ZNF449Q6P9G9 518 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 C16orf54Q6UWD8 224 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 GFRALQ6UXV0 394 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 CCNI2Q6ZMN8 369 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 KRBA2Q6ZNG9 492 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 GPR180Q86V85 440 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 SFR1Q86XK3 245 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 TMEM219Q86XT9 240 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 LINC00346Q8IVM7 164 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 ODF3L1Q8IXM7 274 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 SCYL3Q8IZE3 742 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 CIARTQ8N365 385 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 RASGEF1CQ8N431 466 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 MAB21L3Q8N8X9 362 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 POC5Q8NA72 575 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 SLC44A1Q8WWI5 657 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 ABTB1Q969K4 478 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 PAFAH2Q99487 392 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 SEMA3CQ99985 751 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 DNAJC18Q9H819 358 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 LRRC4Q9HBW1 653 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 EPB41L5Q9HCM4 733 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 LTB4R2Q9NPC1 389 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 FBXL2Q9UKC9 423 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 B3GALT5Q9Y2C3 310 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 PCDHAC2Q9Y5I4 1007 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 CD163L1Q9NR16 1453 aa3.2□□□□□ -1.9
HMGB3P12-201ENST00000438745 MAP3K19Q56UN5 1328 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 KANSL1LA0AUZ9 987 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 FAM172BPA6NC97 362 aa3.19□□□□□ -1.9
HMGB3P12-201ENST00000438745 ASPDHA6ND91 283 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms