RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 C19orf43Q9BQ61 176 aa14.45□□□□□ -0.1
PRKDC-203ENST00000432581 C17orf62Q9BQA9 187 aa14.45□□□□□ -0.1
PRKDC-203ENST00000432581 FERMT1Q9BQL6 677 aa14.45□□□□□ -0.1
PRKDC-203ENST00000432581 DHRS4Q9BTZ2 278 aa14.45□□□□□ -0.1
PRKDC-203ENST00000432581 FICDQ9BVA6 458 aa14.45□□□□□ -0.1
PRKDC-203ENST00000432581 MFRPQ9BY79 579 aa14.45□□□□□ -0.1
PRKDC-203ENST00000432581 CASS4Q9NQ75 786 aa14.45□□□□□ -0.1
PRKDC-203ENST00000432581 C5AR2Q9P296 337 aa14.45□□□□□ -0.1
PRKDC-203ENST00000432581 DOPEY1Q5JWR5 2465 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 ESPL1Q14674 2120 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 A6NL46 340 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 E7EQ34 232 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 CRTAMO95727 393 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 ATP1B2P14415 290 aaPredicted RBP14.44□□□□□ -0.1
PRKDC-203ENST00000432581 ST6GAL1P15907 406 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 ITGALP20701 1170 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 AGXTP21549 392 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 XIAPP98170 497 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 ATP1A4Q13733 1029 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 PRR30Q53SZ7 412 aaPredicted RBP14.44□□□□□ -0.1
PRKDC-203ENST00000432581 VWA5B1Q5TIE3 1220 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 ZNF449Q6P9G9 518 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 SARM1Q6SZW1 724 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 RANBP10Q6VN20 620 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 CCDC50Q8IVM0 306 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 KATNAL2Q8IYT4 538 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 NXPE1Q8N323 547 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 RBMXL3Q8N7X1 1067 aaKnown RBP14.44□□□□□ -0.1
PRKDC-203ENST00000432581 NAT14Q8WUY8 206 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 HAUS1Q96CS2 278 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 RBM41Q96IZ5 413 aaKnown RBP14.44□□□□□ -0.1
PRKDC-203ENST00000432581 FERD3LQ96RJ6 166 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 TFB2MQ9H5Q4 396 aaKnown RBP14.44□□□□□ -0.1
PRKDC-203ENST00000432581 MVB12BQ9H7P6 319 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 VPS37BQ9H9H4 285 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 LUZP4Q9P127 313 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 MAP10Q9P2G4 905 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 AAR2Q9Y312 384 aaKnown RBP14.44□□□□□ -0.1
PRKDC-203ENST00000432581 ALG6Q9Y672 507 aa14.44□□□□□ -0.1
PRKDC-203ENST00000432581 PRRC2CQ9Y520 2896 aaKnown RBP14.44□□□□□ -0.1
PRKDC-203ENST00000432581 CCDC66A2RUB6 948 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 C2orf74A8MZ97 194 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 H7C0C1 242 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 APOC4-APOC2K7ER74 178 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 BTN3A3O00478 584 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 BTN3A1O00481 513 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 DDX3YO15523 660 aaKnown RBP14.43□□□□□ -0.1
PRKDC-203ENST00000432581 KLHL41O60662 606 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 MFAP3LO75121 409 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 IGHEP01854 428 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 APOC2P02655 101 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 ADRA1AP35348 466 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 HADHAP40939 763 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 ATP5OP48047 213 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 CD151P48509 253 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 LMAN1P49257 510 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 HADHBP55084 474 aaKnown RBP14.43□□□□□ -0.1
PRKDC-203ENST00000432581 RPA4Q13156 261 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 MRPL49Q13405 166 aaKnown RBP14.43□□□□□ -0.1
PRKDC-203ENST00000432581 PRPSAP1Q14558 356 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 EIF2S3LQ2VIR3 472 aaKnown RBP14.43□□□□□ -0.1
PRKDC-203ENST00000432581 PTCHD3Q3KNS1 767 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 FAM69BQ5VUD6 431 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 BBS12Q6ZW61 710 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 SNX20Q7Z614 316 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 GPR135Q8IZ08 494 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 IQCKQ8N0W5 287 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 TRAPPC9Q96Q05 1148 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 GORASP1Q9BQQ3 440 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 OR52A5Q9H2C5 316 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 COG4Q9H9E3 785 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.43□□□□□ -0.1
PRKDC-203ENST00000432581 MED13Q9UHV7 2174 aa14.43□□□□□ -0.1
PRKDC-203ENST00000432581 TNRC6AQ8NDV7 1962 aaKnown RBP14.42□□□□□ -0.1
PRKDC-203ENST00000432581 CREBBPQ92793 2442 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 SHANK1Q9Y566 2161 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 ZNF749O43361 778 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 ALPPP05187 535 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 CD63P08962 238 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 GSTM1P09488 218 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 RNF224P0DH78 156 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 RBL1P28749 1068 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 ZNF140P52738 457 aaPredicted RBP14.42□□□□□ -0.1
PRKDC-203ENST00000432581 GSTM4Q03013 218 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 SSPNQ14714 243 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 GPR33Q49SQ1 333 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 ZNF385CQ66K41 422 aaPredicted RBP14.42□□□□□ -0.1
PRKDC-203ENST00000432581 CDHR3Q6ZTQ4 885 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 HOOK3Q86VS8 718 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 AMIGO1Q86WK6 493 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 CLEC1AQ8NC01 280 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 OR52E1Q8NGJ3 308 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 OR13C4Q8NGS5 318 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 PRR7Q8TB68 274 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 N4BP2L2Q92802 583 aaPredicted RBP14.42□□□□□ -0.1
PRKDC-203ENST00000432581 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.42□□□□□ -0.15e-16■■■■■ 45.8
PRKDC-203ENST00000432581 FER1L6-AS2Q96M78 137 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 PPP1R2P1Q96PQ5 205 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 ZDHHC3Q9NYG2 299 aa14.42□□□□□ -0.1
PRKDC-203ENST00000432581 FEZ2Q9UHY8 353 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms