RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 RAD18Q9NS91 495 aa6.45□□□□□ -1.38
SMC6-205ENST00000430591 TREX1Q9NSU2 369 aa6.45□□□□□ -1.38
SMC6-205ENST00000430591 ATRXP46100 2492 aa6.45□□□□□ -1.38
SMC6-205ENST00000430591 CCDC88CQ9P219 2028 aa6.45□□□□□ -1.38
SMC6-205ENST00000430591 IGHV5-51A0A0C4DH38 117 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 KIR2DS5A0A0G2JLQ3 304 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 A0A0G2JNG1 304 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 HEATR9A2RTY3 570 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 EFCAB7A8K855 629 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 KIR2DS3K7RE56 304 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 TTI1O43156 1089 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 PSMD3O43242 534 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 HCRTR1O43613 425 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 NIPSNAP2O75323 286 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 PPFIA2O75334 1257 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 TCEA3O75764 348 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 VAPBO95292 243 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 TIAF1O95411 115 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 CPNE6O95741 557 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 VIPP01282 170 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 MTHFD1P11586 935 aaKnown RBP6.44□□□□□ -1.38
SMC6-205ENST00000430591 PVRP15151 417 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 PNLIPP16233 465 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 ZNF28P17035 718 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 XRCC1P18887 633 aaPredicted RBP6.44□□□□□ -1.38
SMC6-205ENST00000430591 TPSB2P20231 275 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 IDSP22304 550 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 CCKBRP32239 447 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 CCR7P32248 378 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 LIMK2P53671 638 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 DMPKQ09013 629 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 PRKG2Q13237 762 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 BIRC2Q13490 618 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 BOP1Q14137 746 aaKnown RBP6.44□□□□□ -1.38
SMC6-205ENST00000430591 KIR2DS5Q14953 304 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 FASTKD3Q14CZ7 662 aaKnown RBP6.44□□□□□ -1.38
SMC6-205ENST00000430591 TPSAB1Q15661 275 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 PCID2Q5JVF3 399 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 RNASEH2BQ5TBB1 312 aaKnown RBP6.44□□□□□ -1.38
SMC6-205ENST00000430591 PRAMEF17Q5VTA0 474 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 IZUMO3Q5VZ72 239 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 METRNLQ641Q3 311 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 ANKS6Q68DC2 871 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 CAPRIN2Q6IMN6 1127 aaKnown RBP6.44□□□□□ -1.38
SMC6-205ENST00000430591 SYT10Q6XYQ8 523 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 SLCO4C1Q6ZQN7 724 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 CENPUQ71F23 418 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 ARHGAP22Q7Z5H3 698 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 LINC00523Q86TU6 105 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 SLC9B2Q86UD5 537 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 TRIM73Q86UV7 250 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 TMEM151BQ8IW70 566 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 DENND6AQ8IWF6 608 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 TRIM48Q8IWZ4 208 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 SPACA3Q8IXA5 215 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 CACTIN-AS1Q8N1I8 211 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 C2orf73Q8N5S3 287 aaPredicted RBP6.44□□□□□ -1.38
SMC6-205ENST00000430591 GOLGA6L1Q8N7Z2 621 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 BMPERQ8N8U9 685 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 PPHLN1Q8NEY8 458 aaKnown RBP6.44□□□□□ -1.38
SMC6-205ENST00000430591 OR5AR1Q8NGP9 310 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 OR2L2Q8NH16 312 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 WDR36Q8NI36 951 aaKnown RBP6.44□□□□□ -1.38
SMC6-205ENST00000430591 HM13Q8TCT9 377 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 DTX3LQ8TDB6 740 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 ART4Q93070 314 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 ZNF669Q96BR6 464 aaPredicted RBP6.44□□□□□ -1.38
SMC6-205ENST00000430591 CXorf40BQ96DE9 158 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 ELMO2Q96JJ3 720 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 SIGLEC10Q96LC7 697 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 SERPINB12Q96P63 405 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 IL17FQ96PD4 163 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 RANBP9Q96S59 729 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 SRPK1Q96SB4 655 aaKnown RBP6.44□□□□□ -1.38
SMC6-205ENST00000430591 NAPGQ99747 312 aaPredicted RBP6.44□□□□□ -1.38
SMC6-205ENST00000430591 FRMD8P1Q9BZ68 369 aaPredicted RBP6.44□□□□□ -1.38
SMC6-205ENST00000430591 COG4Q9H9E3 785 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 NCKIPSDQ9NZQ3 722 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 DKK4Q9UBT3 224 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 GDF2Q9UK05 429 aaPredicted RBP6.44□□□□□ -1.38
SMC6-205ENST00000430591 SOX13Q9UN79 622 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 ZNF232Q9UNY5 417 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 CDYLQ9Y232 598 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 B3GALT1Q9Y5Z6 326 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 NFS1Q9Y697 457 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 CACNA1GO43497 2377 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 IGSF10Q6WRI0 2623 aa6.44□□□□□ -1.38
SMC6-205ENST00000430591 PCSK5Q92824 1860 aa6.43□□□□□ -1.38
SMC6-205ENST00000430591 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.43□□□□□ -1.38
SMC6-205ENST00000430591 ZCWPW2A0A1B0GU75 182 aa6.43□□□□□ -1.38
SMC6-205ENST00000430591 SLC5A10A0PJK1 596 aa6.43□□□□□ -1.38
SMC6-205ENST00000430591 SERTM1A2A2V5 107 aa6.43□□□□□ -1.38
SMC6-205ENST00000430591 OR6C74A6NCV1 312 aa6.43□□□□□ -1.38
SMC6-205ENST00000430591 TMEM8BA6NDV4 472 aa6.43□□□□□ -1.38
SMC6-205ENST00000430591 LILRA5A6NI73 299 aa6.43□□□□□ -1.38
SMC6-205ENST00000430591 ERI2A8K979 691 aaKnown RBP6.43□□□□□ -1.38
SMC6-205ENST00000430591 BTN3A3O00478 584 aa6.43□□□□□ -1.38
SMC6-205ENST00000430591 CD3EAPO15446 510 aaKnown RBP6.43□□□□□ -1.38
SMC6-205ENST00000430591 NRDCO43847 1150 aa6.43□□□□□ -1.38
SMC6-205ENST00000430591 NRP2O60462 931 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms