RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 GAS1P54826 345 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 SLC12A3P55017 1021 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 BNC1Q01954 994 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 TRAF3Q13114 568 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 UBE2V1Q13404 147 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 KRT33BQ14525 404 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 IZUMO4Q1ZYL8 232 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 KIF19Q2TAC6 998 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 C6orf136Q5SQH8 315 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 RNASEH2BQ5TBB1 312 aaKnown RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 FAM91A1Q658Y4 838 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 PLA2G4FQ68DD2 849 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 SIGIRRQ6IA17 410 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 LCN10Q6JVE6 187 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 FAM122CQ6P4D5 195 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 CNSTQ6PJW8 725 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 FIGLAQ6QHK4 219 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 ZBTB49Q6ZSB9 765 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 ZC3HC1Q86WB0 502 aaKnown RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 FOXP4Q8IVH2 680 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 CNTN4Q8IWV2 1026 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 C10orf53Q8N6V4 93 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 ATAD1Q8NBU5 361 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 NEXN-AS1Q8NBZ9 246 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 AGBL3Q8NEM8 1001 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 ACVR1CQ8NER5 493 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 OR2AJ1Q8NGZ0 328 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 CTCFLQ8NI51 663 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 TBC1D16Q8TBP0 767 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 EXT2Q93063 718 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 OTUB1Q96FW1 271 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 RMDN2Q96LZ7 410 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 HARBI1Q96MB7 349 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 DUX5Q96PT3 197 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 NUDCD1Q96RS6 583 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 FERMT1Q9BQL6 677 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 TRIM7Q9C029 511 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 IARS2Q9NSE4 1012 aaKnown RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 OSER1Q9NX31 292 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 OCIAD1Q9NX40 245 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 RHCGQ9UBD6 479 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 STK39Q9UEW8 545 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 FETUBQ9UGM5 382 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 ARMCX3Q9UH62 379 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 DDX25Q9UHL0 483 aaKnown RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 RCOR1Q9UKL0 485 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 ODF2LQ9ULJ1 636 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 ATXN2Q99700 1313 aaKnown RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 KANSL1LA0AUZ9 987 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 TMEM221A6NGB7 291 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 EIF4E1BA6NMX2 242 aaKnown RBP2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 J3QR06 171 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 PLK4O00444 970 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 ZNF263O14978 683 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 TO15178 435 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 SLC16A5O15375 505 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 ZBTB43O43298 467 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 STX6O43752 255 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 VEGFDO43915 354 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 OR10H2O60403 315 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 SELENOFO60613 162 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 ACSL3O95573 720 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 IGHDP01880 384 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 PCP11498 1178 aaKnown RBP2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 SRCP12931 536 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 GJA1P17302 382 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 CD22P20273 847 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 NR2F2P24468 414 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 HNRNPH1P31943 449 aaKnown RBP2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 PCGF2P35227 344 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 GMPSP49915 693 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 NME5P56597 212 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 HSD17B7P56937 341 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 UBASH3AP57075 661 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 KRTAP10-5P60370 271 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 RPA4Q13156 261 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 MELKQ14680 651 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 SMC1AQ14683 1233 aaKnown RBP2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 ODF2Q5BJF6 829 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 XKR9Q5GH70 373 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 CCDC158Q5M9N0 1113 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 FAM69BQ5VUD6 431 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 WDR73Q6P4I2 378 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 SPSB3Q6PJ21 355 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 GSG1LQ6UXU4 331 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 C16orf82Q7Z2V1 217 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 TMEM173Q86WV6 379 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 LMNTD2Q8IXW0 634 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 MAGEC3Q8TD91 643 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 HEXDCQ8WVB3 486 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 ROBO4Q8WZ75 1007 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 ORAI1Q96D31 301 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 ERLEC1Q96DZ1 483 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 SPDL1Q96EA4 605 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 ADGRG7Q96K78 797 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 MS4A10Q96PG2 267 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 ZNF385AQ96PM9 386 aaKnown RBP2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 PRAM1Q96QH2 718 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 PKP4Q99569 1192 aa2.86□□□□□ -1.95
HMGB1P9-201ENST00000429856 UTP14AQ9BVJ6 771 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms