RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 CPNE9Q8IYJ1 553 aa12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 MREGQ8N565 214 aa12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 CFAP61Q8NHU2 1237 aa12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 DCAKDQ8WVC6 231 aa12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 SKA2Q8WVK7 121 aaPredicted RBP12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 SH3KBP1Q96B97 665 aa12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 FOPNLQ96NB1 174 aa12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 FERD3LQ96RJ6 166 aa12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 MVB12BQ9H7P6 319 aa12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 LRIT1Q9P2V4 623 aa12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 FETUBQ9UGM5 382 aa12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 TSR3Q9UJK0 312 aaKnown RBP12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 ZNF180Q9UJW8 692 aa12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 ASF1AQ9Y294 204 aa12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 RNF215Q9Y6U7 377 aa12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 COLEC10Q9Y6Z7 277 aa12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 CEP250Q9BV73 2442 aa12.56□□□□□ -0.4
CCHCR1-205ENST00000428174 EIF3FO00303 357 aaPredicted RBP12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 PPM1DO15297 605 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 SHBGP04278 402 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 MPC1LP0DKB6 136 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 STMN1P16949 149 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 ACP1P24666 158 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 CNTFP26441 200 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 NDUFS1P28331 727 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 NOVA1P51513 510 aaKnown RBP12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 PGGT1BP53609 377 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 BMPR2Q13873 1038 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 ZNF460Q14592 562 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 LGSNQ5TDP6 509 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 GLRX5Q86SX6 157 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 CEP97Q8IW35 865 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 RBM12BQ8IXT5 1001 aaKnown RBP12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 PHC3Q8NDX5 983 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 IFI44Q8TCB0 444 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 CCDC74AQ96AQ1 378 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 LINGO1Q96FE5 620 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 SLC38A3Q99624 504 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 DHRS4Q9BTZ2 278 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 CAB39LQ9H9S4 337 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 POPDC3Q9HBV1 291 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 SYTL2Q9HCH5 934 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 SLC24A2Q9UI40 661 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 COL5A1P20908 1838 aaPredicted RBP12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 LAMA1P25391 3075 aa12.55□□□□□ -0.4
CCHCR1-205ENST00000428174 PRAMEF33A0A0G2JMD5 474 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 HMX2A2RU54 273 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 PHGDHO43175 533 aaKnown RBP12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 KRT37O76014 449 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 RPN2P04844 631 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 NUDT17P0C025 328 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 CEACAM1P13688 526 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 PNLIPP16233 465 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 GCAP28676 217 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 CRABP2P29373 138 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 ACADVLP49748 655 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 IL2P60568 153 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 RAB10P61026 200 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 ZKSCAN8Q15776 578 aaPredicted RBP12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 CCDC157Q569K6 752 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 PERM1Q5SV97 790 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 LRRC8EQ6NSJ5 796 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 ADGRD1Q6QNK2 874 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 UNC5DQ6UXZ4 953 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 CYHR1Q6ZMK1 362 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 TMEM26Q6ZUK4 368 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 RAPH1Q70E73 1250 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 PIWIL4Q7Z3Z4 852 aaKnown RBP12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 ZNF438Q7Z4V0 828 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 ZNF761Q86XN6 746 aaPredicted RBP12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 TBC1D21Q8IYX1 336 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 MYO1HQ8N1T3 1032 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 NKAPQ8N5F7 415 aaKnown RBP12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 EEF1AKMT1Q8WVE0 214 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 ZFPM2Q8WW38 1151 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 TRIT1Q9H3H1 467 aaKnown RBP12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 UCK1Q9HA47 277 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 PPCSQ9HAB8 311 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 GPAMQ9HCL2 828 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 PSMC3IPQ9P2W1 217 aaPredicted RBP12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 RUVBL2Q9Y230 463 aaKnown RBP12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 NFS1Q9Y697 457 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 DNAH14Q0VDD8 3507 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 FRYLO94915 3013 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 BPTFQ12830 3046 aa12.54□□□□□ -0.4
CCHCR1-205ENST00000428174 ZNF292O60281 2723 aa12.53□□□□□ -0.4
CCHCR1-205ENST00000428174 IQANK1A0A1B0GTG1 560 aa12.53□□□□□ -0.4
CCHCR1-205ENST00000428174 SPAARA0A1B0GVQ0 90 aa12.53□□□□□ -0.4
CCHCR1-205ENST00000428174 DCDC2BA2VCK2 349 aa12.53□□□□□ -0.4
CCHCR1-205ENST00000428174 LILRA5A6NI73 299 aa12.53□□□□□ -0.4
CCHCR1-205ENST00000428174 TRIM49D1C9J1S8 452 aa12.53□□□□□ -0.4
CCHCR1-205ENST00000428174 ZW10O43264 779 aa12.53□□□□□ -0.4
CCHCR1-205ENST00000428174 KCNK5O95279 499 aa12.53□□□□□ -0.4
CCHCR1-205ENST00000428174 GP1BAP07359 652 aa12.53□□□□□ -0.4
CCHCR1-205ENST00000428174 SNRPAP09012 282 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-205ENST00000428174 ZNF37AP17032 561 aaPredicted RBP12.53□□□□□ -0.4
CCHCR1-205ENST00000428174 ALDH4A1P30038 563 aa12.53□□□□□ -0.4
CCHCR1-205ENST00000428174 HOXD11P31277 338 aaPredicted RBP12.53□□□□□ -0.4
CCHCR1-205ENST00000428174 GPR3P46089 330 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms