RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 EPYCQ99645 322 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 LRRC4CQ9HCJ2 640 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 IMP3Q9NV31 184 aaKnown RBP14.23□□□□□ -0.13
PTPN13-203ENST00000427191 VIPP01282 170 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 IGFBP4P22692 258 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 DNAJB1P25685 340 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 SLC7A1P30825 629 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 LIMK2P53671 638 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 BNIP1Q12981 228 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 WSCD2Q2TBF2 565 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 GEMIN6Q8WXD5 167 aaKnown RBP14.23□□□□□ -0.13
PTPN13-203ENST00000427191 TMEM9Q9P0T7 183 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 CCDC85CA6NKD9 419 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 APODP05090 189 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 ZSCAN5DPP0CG00 497 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 DEFB132Q7Z7B7 95 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 C7orf57Q8NEG2 295 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 TBC1D17Q9HA65 648 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 ZNF69Q9UC07 566 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 FAM234BA2RU67 622 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 ACOX3O15254 700 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 GADD45GO95257 159 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 ALPPP05187 535 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 SLC30A10Q6XR72 485 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 SLC22A18Q96BI1 424 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 BPIFA1Q9NP55 256 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 SPATA7Q9P0W8 599 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 CXCR6O00574 342 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 TNFRSF10BO14763 440 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 IL7RP16871 459 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 CRYBB1P53674 252 aaPredicted RBP14.22□□□□□ -0.13
PTPN13-203ENST00000427191 NOMO3P69849 1222 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 PARGQ86W56 976 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 SPPL2BQ8TCT7 592 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 TBATAQ96M53 351 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 IFT27Q9BW83 186 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 GTPBP2Q9BX10 602 aaKnown RBP14.22□□□□□ -0.13
PTPN13-203ENST00000427191 GTF2IRD1Q9UHL9 959 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 SCP2D1Q9UJQ7 156 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 MAFO75444 373 aaPredicted RBP14.22□□□□□ -0.13
PTPN13-203ENST00000427191 RP2O75695 350 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 IFNA2P01563 188 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 ESR1P03372 595 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 NT5EP21589 574 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 FMO1Q01740 532 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 ZDHHC21Q8IVQ6 265 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 KCNN1Q92952 543 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 MYNNQ9NPC7 610 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 SPIN1Q9Y657 262 aaPredicted RBP14.22□□□□□ -0.13
PTPN13-203ENST00000427191 SHOX2O60902 331 aaPredicted RBP14.22□□□□□ -0.13
PTPN13-203ENST00000427191 SPIN4Q56A73 249 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 CADM2Q8N3J6 435 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 SERINC1Q9NRX5 453 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 A8MX80 341 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 CDH1P12830 882 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 RPIAP49247 311 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 TPTEP56180 551 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 BORAQ6PGQ7 559 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 ZNF517Q6ZMY9 492 aaPredicted RBP14.22□□□□□ -0.13
PTPN13-203ENST00000427191 ZC3HC1Q86WB0 502 aaKnown RBP14.22□□□□□ -0.13
PTPN13-203ENST00000427191 BRSK1Q8TDC3 778 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 C16orf58Q96GQ5 468 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 PDGFDQ9GZP0 370 aaPredicted RBP14.22□□□□□ -0.13
PTPN13-203ENST00000427191 TMED5Q9Y3A6 229 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 OR2AG2A6NM03 316 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 PAPSS1O43252 624 aaPredicted RBP14.22□□□□□ -0.13
PTPN13-203ENST00000427191 UGT2B4P06133 528 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 PTGER3P43115 390 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 RAB12Q6IQ22 244 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 TMEM126BQ8IUX1 230 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 P2RY11Q96G91 374 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 C11orf16Q9NQ32 467 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 CYTH4Q9UIA0 394 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 MROH2AA6NES4 1674 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 PAGE1O75459 146 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 ATP6AP2O75787 350 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 DNAJA1P31689 397 aaKnown RBP14.22□□□□□ -0.13
PTPN13-203ENST00000427191 MPIP34949 423 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 CLCQ05315 142 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 NOMO1Q15155 1222 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 ASTE1Q2TB18 679 aaPredicted RBP14.22□□□□□ -0.13
PTPN13-203ENST00000427191 MTMR9Q96QG7 549 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 NMUR2Q9GZQ4 415 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 PTBP2Q9UKA9 531 aaKnown RBP14.22□□□□□ -0.13
PTPN13-203ENST00000427191 TLR5O60602 858 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 NDST2P52849 883 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 OGFRL1Q5TC84 451 aaPredicted RBP14.22□□□□□ -0.13
PTPN13-203ENST00000427191 FOXR1Q6PIV2 292 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 ASB18Q6ZVZ8 466 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 ABHD13Q7L211 337 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 PPP1R13LQ8WUF5 828 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 SLC35G5Q96KT7 338 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 ZNF285Q96NJ3 590 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 PNPOQ9NVS9 261 aa14.22□□□□□ -0.13
PTPN13-203ENST00000427191 NFATC1O95644 943 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 CAPZA1P52907 286 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 C1orf109Q9NX04 203 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 DISC1C4P0D8 188 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 CASRP41180 1078 aa14.21□□□□□ -0.13
PTPN13-203ENST00000427191 NSG1P42857 185 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms