RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 UTP4Q969X6 686 aaKnown RBP14.87□□□□□ -0.03
ACTB-204ENST00000425660 HIST1H2AHQ96KK5 128 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 C3orf30Q96M34 536 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 LENG8Q96PV6 779 aaPredicted RBP14.87□□□□□ -0.03
ACTB-204ENST00000425660 MIPEPQ99797 713 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 CCT7Q99832 543 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 HIST1H2AJQ99878 128 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 H2AFJQ9BTM1 129 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 TEX101Q9BY14 249 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 NOL11Q9H8H0 719 aaKnown RBP14.87□□□□□ -0.03
ACTB-204ENST00000425660 SLC2A4RGQ9NR83 387 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 KLC4Q9NSK0 619 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 WWOXQ9NZC7 414 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 K7EPI3 171 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 ASGR2P07307 311 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 KRT16P08779 473 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 ZNF8P17098 575 aaPredicted RBP14.87□□□□□ -0.03
ACTB-204ENST00000425660 MNAT1P51948 309 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 ERVPABLB-1P60509 514 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 PLOD1Q02809 727 aaPredicted RBP14.87□□□□□ -0.03
ACTB-204ENST00000425660 TRAF3Q13114 568 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 GTF2H3Q13889 308 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 FGL2Q14314 439 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 RBBP7Q16576 425 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 ZXDCQ2QGD7 858 aaPredicted RBP14.87□□□□□ -0.03
ACTB-204ENST00000425660 SYTL3Q4VX76 610 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 NXNQ6DKJ4 435 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 LETMD1Q6P1Q0 360 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 USP30Q70CQ3 517 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 C11orf96Q7Z7L8 435 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 HEATR4Q86WZ0 1026 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 TRAPPC5Q8IUR0 188 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 MCOLN3Q8TDD5 553 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 SKA2Q8WVK7 121 aaPredicted RBP14.87□□□□□ -0.03
ACTB-204ENST00000425660 IPPKQ9H8X2 491 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 SLC40A1Q9NP59 571 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 OPTCQ9UBM4 332 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 GPR89AB7ZAQ6 455 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 PIP5K1BO14986 540 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 NARSO43776 548 aaKnown RBP14.86□□□□□ -0.03
ACTB-204ENST00000425660 STK16O75716 305 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 GPR89BP0CG08 455 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 SRFP11831 508 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 SLC6A12P48065 614 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 PIK3CGP48736 1102 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 CCR3P51677 355 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 TTC31Q49AM3 519 aaPredicted RBP14.86□□□□□ -0.03
ACTB-204ENST00000425660 XKR7Q5GH72 579 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 NEK5Q6P3R8 708 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 MBOAT1Q6ZNC8 495 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 RINLQ6ZS11 566 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 KBTBD6Q86V97 674 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 HOMEZQ8IX15 550 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 C10orf67Q8IYJ2 551 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 LILRA3Q8N6C8 439 aaPredicted RBP14.86□□□□□ -0.03
ACTB-204ENST00000425660 TEX9Q8N6V9 391 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 TP53I13Q8NBR0 393 aaPredicted RBP14.86□□□□□ -0.03
ACTB-204ENST00000425660 MRGPRX1Q96LB2 322 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 RAB3IPQ96QF0 476 aaPredicted RBP14.86□□□□□ -0.03
ACTB-204ENST00000425660 NTMT1Q9BV86 223 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 SLC6A17Q9H1V8 727 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 SLC32A1Q9H598 525 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 PREBQ9HCU5 417 aa14.86□□□□□ -0.03
ACTB-204ENST00000425660 COPG1Q9Y678 874 aaKnown RBP14.86□□□□□ -0.03
ACTB-204ENST00000425660 GYG2O15488 501 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 CCNT2O60583 730 aaKnown RBP14.85□□□□□ -0.03
ACTB-204ENST00000425660 VPS4BO75351 444 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 CHEK2O96017 543 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 PCCBP05166 539 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 PRR35P0CG20 571 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 GDF5P43026 501 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 PREPP48147 710 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 EOGTQ5NDL2 527 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 FAM219BQ5XKK7 198 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 RNF165Q6ZSG1 346 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 LRRC70Q7Z2Q7 622 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 FBXO15Q8NCQ5 510 aaPredicted RBP14.85□□□□□ -0.03
ACTB-204ENST00000425660 RBM15BQ8NDT2 890 aaKnown RBP14.85□□□□□ -0.03
ACTB-204ENST00000425660 OR4F6Q8NGB9 312 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 OR2L2Q8NH16 312 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 OR14C36Q8NHC7 312 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 FAM3CQ92520 227 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 SIPA1Q96FS4 1042 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 CATSPER2Q96P56 530 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 DPEP2Q9H4A9 486 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 AKTIPQ9H8T0 292 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 MBNL1Q9NR56 388 aaKnown RBP14.85□□□□□ -0.03
ACTB-204ENST00000425660 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.85□□□□□ -0.032e-13■■■□□ 16.6
ACTB-204ENST00000425660 ATP6AP2A0A1C7CYW4 349 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 ARHGEF33A8MVX0 844 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 B2RBV5 119 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 UBDO15205 165 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 GSC2O15499 205 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 KATNA1O75449 491 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 CRCPO75575 148 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 ATP6AP2O75787 350 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 OR4F21O95013 312 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 PAK4O96013 591 aaPredicted RBP14.85□□□□□ -0.03
ACTB-204ENST00000425660 FOSL2P15408 326 aa14.85□□□□□ -0.03
ACTB-204ENST00000425660 EPB42P16452 691 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms