RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 MYBPC3Q14896 1274 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 BCL7AQ4VC05 210 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 KAZNQ674X7 775 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TLDC1Q6P9B6 456 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CERS6Q6ZMG9 384 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 FAM83HQ6ZRV2 1179 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 AMIGO1Q86WK6 493 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CCDC50Q8IVM0 306 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 GALNT16Q8N428 558 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ZBTB2Q8N680 514 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 RBMXL3Q8N7X1 1067 aaKnown RBP11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 HAUS1Q96CS2 278 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 OLFM3Q96PB7 478 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TTC1Q99614 292 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 NDC1Q9BTX1 674 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TFB2MQ9H5Q4 396 aaKnown RBP11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PCMTD2Q9NV79 361 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 POLG2Q9UHN1 485 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TMPRSS11EQ9UL52 423 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SRPK3Q9UPE1 567 aa11.91□□□□□ -0.5
HLA-DQB3-203ENST00000425319 C3orf70A6NLC5 250 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 QSOX1O00391 747 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CBFA2T2O43439 604 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CBX6O95503 412 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 CTNNA2P26232 953 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 RAPSNQ13702 412 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ATP1A4Q13733 1029 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PRKD1Q15139 912 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PTCHD3Q3KNS1 767 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PLEKHN1Q494U1 663 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 GPR33Q49SQ1 333 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 TFDP3Q5H9I0 405 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 DCAF10Q5QP82 559 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 IGFL3Q6UXB1 125 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ZC3H18Q86VM9 953 aaKnown RBP11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 RCOR2Q8IZ40 523 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 SLC38A9Q8NBW4 561 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 OR1L3Q8NH93 324 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PROKR1Q8TCW9 393 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 ASF1BQ9NVP2 202 aa11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 FEZ2Q9UHY8 353 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 PTRH2Q9Y3E5 179 aaKnown RBP11.9□□□□□ -0.5
HLA-DQB3-203ENST00000425319 H7C0C1 242 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 MYBL2P10244 700 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 HNRNPH3P31942 346 aaKnown RBP11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 SHMT2P34897 504 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 RORAP35398 523 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ATP5OP48047 213 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 LMAN1P49257 510 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ARSFP54793 590 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PLOD1Q02809 727 aaPredicted RBP11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 AIMP2Q13155 320 aaKnown RBP11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 IQCB1Q15051 598 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CAVIN1Q6NZI2 390 aaKnown RBP11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 FBXO38Q6PIJ6 1188 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 KDELC1Q6UW63 502 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 TAS2R42Q7RTR8 314 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 TMTC1Q8IUR5 882 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 OR4K2Q8NGD2 314 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 TFGQ92734 400 aaPredicted RBP11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 DLG3Q92796 817 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 MRGPRX2Q96LB1 330 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 TRAPPC9Q96Q05 1148 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 C19orf43Q9BQ61 176 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 EPS8L2Q9H6S3 715 aa11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 LUC7LQ9NQ29 371 aaKnown RBP11.89□□□□□ -0.51
HLA-DQB3-203ENST00000425319 WIPF3A6NGB9 483 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 HNRNPRO43390 633 aaKnown RBP11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 KRT86O43790 486 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 LCA5LO95447 670 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 LDLRP01130 860 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PTMAP06454 111 aaKnown RBP11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ST6GAL1P15907 406 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ALAS2P22557 587 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ITGA3P26006 1051 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 DCTP40126 519 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CHRNA4P43681 627 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PRLHRP49683 370 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PRAMEF17Q5VTA0 474 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 AGAP7PQ5VUJ5 663 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ZNF787Q6DD87 383 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 FCRL6Q6DN72 434 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 RHBDD2Q6NTF9 364 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 DUS1LQ6P1R4 473 aaKnown RBP11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 MFSD7Q6UXD7 560 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 SNX20Q7Z614 316 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ZNF567Q8N184 647 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 Q8NA96 180 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 DNAJB14Q8TBM8 379 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 AGAP4Q96P64 663 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 GBP5Q96PP8 586 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PHF12Q96QT6 1004 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 P4HTMQ9NXG6 502 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ZDHHC3Q9NYG2 299 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ACTR10Q9NZ32 417 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 IFNKQ9P0W0 207 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ERRFI1Q9UJM3 462 aaPredicted RBP11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 INTUQ9ULD6 942 aa11.88□□□□□ -0.51
HLA-DQB3-203ENST00000425319 BOD1L1Q8NFC6 3051 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms