RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ZXDCQ2QGD7 858 aaPredicted RBP25.93■■□□□ 1.74
LDB1-202ENST00000425280 KYQ8NBH2 561 aa25.93■■□□□ 1.74
LDB1-202ENST00000425280 OR2T11Q8NH01 316 aa25.93■■□□□ 1.74
LDB1-202ENST00000425280 GLMNQ92990 594 aa25.93■■□□□ 1.74
LDB1-202ENST00000425280 TMEM159Q96B96 161 aa25.93■■□□□ 1.74
LDB1-202ENST00000425280 HIST1H2AHQ96KK5 128 aa25.93■■□□□ 1.74
LDB1-202ENST00000425280 HIST1H2AJQ99878 128 aa25.93■■□□□ 1.74
LDB1-202ENST00000425280 H2AFJQ9BTM1 129 aa25.93■■□□□ 1.74
LDB1-202ENST00000425280 ZCCHC2Q9C0B9 1178 aaKnown RBP25.93■■□□□ 1.74
LDB1-202ENST00000425280 OR2AG1Q9H205 316 aa25.93■■□□□ 1.74
LDB1-202ENST00000425280 SYNCRIPO60506 623 aaKnown RBP25.92■■□□□ 1.74
LDB1-202ENST00000425280 MATN4O95460 622 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 ADH1BP00325 375 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 GPX3P22352 226 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 PREPP48147 710 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 E2F5Q15329 346 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 ZNF658BQ4V348 819 aaPredicted RBP25.92■■□□□ 1.74
LDB1-202ENST00000425280 BCL7AQ4VC05 210 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.92■■□□□ 1.74
LDB1-202ENST00000425280 TCAIMQ8N3R3 496 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 CCT7Q99832 543 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 PFDN4Q9NQP4 134 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 CCDC167Q9P0B6 97 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 AP1G1O43747 822 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 LILRB5O75023 590 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 C5AR1P21730 350 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 HTR6P50406 440 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 STX1BP61266 288 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 ADGRE1Q14246 886 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 MAPRE2Q15555 327 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 ZRSR2Q15696 482 aaKnown RBP25.92■■□□□ 1.74
LDB1-202ENST00000425280 OGFOD2Q6N063 350 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 PGM2L1Q6PCE3 622 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 TTC23LQ6PF05 361 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 DSELQ8IZU8 1212 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 MCOLN3Q8TDD5 553 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 TRIM39Q9HCM9 518 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 SERGEFQ9UGK8 458 aa25.92■■□□□ 1.74
LDB1-202ENST00000425280 GSTM1P09488 218 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 EPB42P16452 691 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 CCND1P24385 295 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 PBLDP30039 288 aaPredicted RBP25.91■■□□□ 1.74
LDB1-202ENST00000425280 CTHP32929 405 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 GSTM4Q03013 218 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 TBL3Q12788 808 aaKnown RBP25.91■■□□□ 1.74
LDB1-202ENST00000425280 ABRQ12979 859 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 PAOXQ6QHF9 649 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 NET1Q7Z628 596 aaPredicted RBP25.91■■□□□ 1.74
LDB1-202ENST00000425280 PLA2G15Q8NCC3 412 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 OR9I1Q8NGQ6 314 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 SLC32A1Q9H598 525 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 EFCAB1Q9HAE3 211 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 IGLON5A6NGN9 336 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 CIB2O75838 187 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 ACADVLP49748 655 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 HNMTP50135 292 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 AP1S2P56377 157 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 KIF19Q2TAC6 998 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 C16orf89Q6UX73 402 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 HDDC3Q8N4P3 179 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 MAGEC3Q8TD91 643 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 NPAS2Q99743 824 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 NTMT1Q9BV86 223 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 ATXN10Q9UBB4 475 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 GULP1Q9UBP9 304 aa25.91■■□□□ 1.74
LDB1-202ENST00000425280 KRT87PA6NCN2 255 aa25.9■■□□□ 1.74
LDB1-202ENST00000425280 PABPN1LA6NDY0 278 aaKnown RBP25.9■■□□□ 1.74
LDB1-202ENST00000425280 PSIP1O75475 530 aaKnown RBP25.9■■□□□ 1.74
LDB1-202ENST00000425280 SLC6A12P48065 614 aa25.9■■□□□ 1.74
LDB1-202ENST00000425280 PIK3CGP48736 1102 aa25.9■■□□□ 1.74
LDB1-202ENST00000425280 RPS14P62263 151 aaKnown RBP25.9■■□□□ 1.74
LDB1-202ENST00000425280 KIAA1211LQ6NV74 962 aa25.9■■□□□ 1.74
LDB1-202ENST00000425280 SPATA19Q7Z5L4 167 aa25.9■■□□□ 1.74
LDB1-202ENST00000425280 CHCHD4Q8N4Q1 142 aa25.9■■□□□ 1.74
LDB1-202ENST00000425280 TTYH1Q9H313 450 aaPredicted RBP25.9■■□□□ 1.74
LDB1-202ENST00000425280 RIC8BQ9NVN3 520 aa25.9■■□□□ 1.74
LDB1-202ENST00000425280 ATG2BQ96BY7 2078 aa25.9■■□□□ 1.74
LDB1-202ENST00000425280 UNC80Q8N2C7 3258 aa25.9■■□□□ 1.74
LDB1-202ENST00000425280 A0A1W2PP55 124 aa25.89■■□□□ 1.74
LDB1-202ENST00000425280 EPORP19235 508 aa25.89■■□□□ 1.74
LDB1-202ENST00000425280 HMOX2P30519 316 aa25.89■■□□□ 1.74
LDB1-202ENST00000425280 ZNF776Q68DI1 518 aaPredicted RBP25.89■■□□□ 1.74
LDB1-202ENST00000425280 IL27RAQ6UWB1 636 aa25.89■■□□□ 1.74
LDB1-202ENST00000425280 Q6ZSR9 355 aa25.89■■□□□ 1.74
LDB1-202ENST00000425280 LRRC70Q7Z2Q7 622 aa25.89■■□□□ 1.74
LDB1-202ENST00000425280 FUNDC1Q8IVP5 155 aa25.89■■□□□ 1.74
LDB1-202ENST00000425280 SLC22A15Q8IZD6 547 aa25.89■■□□□ 1.74
LDB1-202ENST00000425280 CFAP61Q8NHU2 1237 aa25.89■■□□□ 1.74
LDB1-202ENST00000425280 RNPEPL1Q9HAU8 725 aa25.89■■□□□ 1.74
LDB1-202ENST00000425280 ARHGEF33A8MVX0 844 aa25.89■■□□□ 1.73
LDB1-202ENST00000425280 PDE5AO76074 875 aa25.89■■□□□ 1.73
LDB1-202ENST00000425280 PCDH8O95206 1070 aa25.89■■□□□ 1.73
LDB1-202ENST00000425280 SNRPB2P08579 225 aaKnown RBP25.89■■□□□ 1.73
LDB1-202ENST00000425280 TRAPPC5Q8IUR0 188 aa25.89■■□□□ 1.73
LDB1-202ENST00000425280 MIER2Q8N344 545 aa25.89■■□□□ 1.73
LDB1-202ENST00000425280 HIC2Q96JB3 615 aa25.89■■□□□ 1.73
LDB1-202ENST00000425280 NKX1-2Q9UD57 310 aaPredicted RBP25.89■■□□□ 1.73
LDB1-202ENST00000425280 CD207Q9UJ71 328 aa25.89■■□□□ 1.73
LDB1-202ENST00000425280 RNF11Q9Y3C5 154 aa25.89■■□□□ 1.73
LDB1-202ENST00000425280 BRWD1Q9NSI6 2320 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms