RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 TRBV23OR9-2A0A075B6M9 112 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 LDOC1O95751 146 aaPredicted RBP16.59■□□□□ 0.25
COL7A1-202ENST00000422991 CKMT1AP12532 417 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 MYF5P13349 255 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 ENO3P13929 434 aaPredicted RBP16.59■□□□□ 0.25
COL7A1-202ENST00000422991 ZNF37AP17032 561 aaPredicted RBP16.59■□□□□ 0.25
COL7A1-202ENST00000422991 SLC19A1P41440 591 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 FASLGP48023 281 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 RPIAP49247 311 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 SLC12A2P55011 1212 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 RAB10P61026 200 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.59■□□□□ 0.25
COL7A1-202ENST00000422991 DUS1LQ6P1R4 473 aaKnown RBP16.59■□□□□ 0.25
COL7A1-202ENST00000422991 NEK10Q6ZWH5 1172 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 CMC1Q7Z7K0 106 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 TDRPQ86YL5 185 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 AVL9Q8NBF6 648 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 EPS8L3Q8TE67 593 aaKnown RBP16.59■□□□□ 0.25
COL7A1-202ENST00000422991 ISL2Q96A47 359 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 CXorf40BQ96DE9 158 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 CDC6Q99741 560 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 IMP3Q9NV31 184 aaKnown RBP16.59■□□□□ 0.25
COL7A1-202ENST00000422991 TSR3Q9UJK0 312 aaKnown RBP16.59■□□□□ 0.25
COL7A1-202ENST00000422991 PADI4Q9UM07 663 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 HEBP2Q9Y5Z4 205 aa16.59■□□□□ 0.25
COL7A1-202ENST00000422991 MED19A0JLT2 244 aaPredicted RBP16.58■□□□□ 0.24
COL7A1-202ENST00000422991 PHGDHO43175 533 aaKnown RBP16.58■□□□□ 0.24
COL7A1-202ENST00000422991 KRT37O76014 449 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 TSPAN12O95859 305 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 ALDOAP04075 364 aaKnown RBP16.58■□□□□ 0.24
COL7A1-202ENST00000422991 MPC1LP0DKB6 136 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 H2AFXP16104 143 aaPredicted RBP16.58■□□□□ 0.24
COL7A1-202ENST00000422991 STMN1P16949 149 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 RGS4P49798 205 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 SERPINB8P50452 374 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 CSRP3P50461 194 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 HHEXQ03014 270 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 RASA2Q15283 850 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 PPM1JQ5JR12 505 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 LRRC8EQ6NSJ5 796 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 GUSBP11Q6P575 273 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 TMEM207Q6UWW9 146 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 ZNF438Q7Z4V0 828 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 SLC9B2Q86UD5 537 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 TRIM48Q8IWZ4 208 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 EEF1AKMT1Q8WVE0 214 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 TFGQ92734 400 aaPredicted RBP16.58■□□□□ 0.24
COL7A1-202ENST00000422991 LINGO1Q96FE5 620 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 SNX15Q9NRS6 342 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 POT1Q9NUX5 634 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 EVA1BQ9NVM1 165 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 EURLQ9NYK6 297 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 CTNNAL1Q9UBT7 734 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 RUVBL2Q9Y230 463 aaKnown RBP16.58■□□□□ 0.24
COL7A1-202ENST00000422991 PLAAQ9Y263 795 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 NFS1Q9Y697 457 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 RNF215Q9Y6U7 377 aa16.58■□□□□ 0.24
COL7A1-202ENST00000422991 PRAMEF33A0A0G2JMD5 474 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 TRIM49D1C9J1S8 452 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 NUDT21O43809 227 aaKnown RBP16.57■□□□□ 0.24
COL7A1-202ENST00000422991 MATN4O95460 622 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 VIPP01282 170 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 SNRPAP09012 282 aaKnown RBP16.57■□□□□ 0.24
COL7A1-202ENST00000422991 SLC35E2BP0CK96 405 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 GLB1P16278 677 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 CKMT2P17540 419 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 CSRP1P21291 193 aaKnown RBP16.57■□□□□ 0.24
COL7A1-202ENST00000422991 CRABP2P29373 138 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 MAGEA12P43365 314 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 SLCO1A2P46721 670 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 DUSP3P51452 185 aaPredicted RBP16.57■□□□□ 0.24
COL7A1-202ENST00000422991 IL2P60568 153 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 DAB2P98082 770 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 IFFO1Q0D2I5 559 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 ABRQ12979 859 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 UNC5DQ6UXZ4 953 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 PIWIL4Q7Z3Z4 852 aaKnown RBP16.57■□□□□ 0.24
COL7A1-202ENST00000422991 DEFB124Q8NES8 71 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 OR6C4Q8NGE1 309 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 SKA2Q8WVK7 121 aaPredicted RBP16.57■□□□□ 0.24
COL7A1-202ENST00000422991 NAT6Q93015 286 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 MTBPQ96DY7 904 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 STN1Q9H668 368 aaKnown RBP16.57■□□□□ 0.24
COL7A1-202ENST00000422991 MVB12BQ9H7P6 319 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 GPAMQ9HCL2 828 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 SLC40A1Q9NP59 571 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.57■□□□□ 0.24
COL7A1-202ENST00000422991 ASF1AQ9Y294 204 aa16.57■□□□□ 0.24
COL7A1-202ENST00000422991 IQANK1A0A1B0GTG1 560 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 EME2A4GXA9 379 aaPredicted RBP16.56■□□□□ 0.24
COL7A1-202ENST00000422991 SMIM23A6NLE4 172 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 PPM1DO15297 605 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 TNFSF14O43557 240 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 CDH16O75309 829 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 ACP1P24666 158 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 NDUFS1P28331 727 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 DNAJC3Q13217 504 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 NR1D2Q14995 579 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 LGSNQ5TDP6 509 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 CYHR1Q6ZMK1 362 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms