RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 TICAM1Q8IUC6 712 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 CHERPQ8IWX8 916 aaKnown RBP13.09□□□□□ -0.31
MCF2L-213ENST00000421756 C10orf111Q8N326 155 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 ZBTB2Q8N680 514 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 PIH1D2Q8WWB5 315 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 KCNJ9Q92806 393 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 MRPL9Q9BYD2 267 aaKnown RBP13.09□□□□□ -0.31
MCF2L-213ENST00000421756 PCDH12Q9NPG4 1184 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 LSM7Q9UK45 103 aaKnown RBP13.09□□□□□ -0.31
MCF2L-213ENST00000421756 INTS6Q9UL03 887 aaKnown RBP13.09□□□□□ -0.31
MCF2L-213ENST00000421756 INSL5Q9Y5Q6 135 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 HS6ST1O60243 411 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 ALBP02768 609 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 HMGCLP35914 325 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 MTHFRP42898 656 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 AARS2Q5JTZ9 985 aaKnown RBP13.09□□□□□ -0.31
MCF2L-213ENST00000421756 SLC8B1Q6J4K2 584 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 Q6ZVL8 140 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 SPRED2Q7Z698 418 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 TMEM150AQ86TG1 271 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 CGREF1Q99674 301 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 INPP5KQ9BT40 448 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 MRPS26Q9BYN8 205 aaKnown RBP13.09□□□□□ -0.31
MCF2L-213ENST00000421756 DLGAP4Q9Y2H0 992 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 DHRS7Q9Y394 339 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 HCFC2Q9Y5Z7 792 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 CNTRLQ7Z7A1 2325 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 SCN5AQ14524 2016 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 PRKD3O94806 890 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 KCNH1O95259 989 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 RPLP2P05387 115 aaKnown RBP13.09□□□□□ -0.31
MCF2L-213ENST00000421756 EPB42P16452 691 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 HRH2P25021 359 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 CHRNB3Q05901 458 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 GRM2Q14416 872 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 UBE2R2Q712K3 238 aaPredicted RBP13.09□□□□□ -0.31
MCF2L-213ENST00000421756 ITIH5Q86UX2 942 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 OR2T12Q8NG77 320 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 TMBIM1Q969X1 311 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 TADA1Q96BN2 335 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 ZNF558Q96NG5 402 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 CARS2Q9HA77 564 aaKnown RBP13.09□□□□□ -0.31
MCF2L-213ENST00000421756 PRDM8Q9NQV8 689 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 ACTR3BQ9P1U1 418 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 ITM2BQ9Y287 266 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 PRKAB1Q9Y478 270 aa13.09□□□□□ -0.31
MCF2L-213ENST00000421756 WDR87Q6ZQQ6 2873 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 ANTXRLA6NF34 631 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 CST1P01037 141 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 ALDH4A1P30038 563 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 RPS9P46781 194 aaKnown RBP13.08□□□□□ -0.32
MCF2L-213ENST00000421756 NR1H2P55055 460 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 SIM2Q14190 667 aaPredicted RBP13.08□□□□□ -0.32
MCF2L-213ENST00000421756 RCAN2Q14206 197 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 SUSD1Q6UWL2 747 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 TMEM26Q6ZUK4 368 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 RBFAQ8N0V3 343 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 HJURPQ8NCD3 748 aaPredicted RBP13.08□□□□□ -0.32
MCF2L-213ENST00000421756 TRPV3Q8NET8 790 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 DPH2Q9BQC3 489 aaPredicted RBP13.08□□□□□ -0.32
MCF2L-213ENST00000421756 WRAP53Q9BUR4 548 aaKnown RBP13.08□□□□□ -0.32
MCF2L-213ENST00000421756 ACAT2Q9BWD1 397 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 ACTL8Q9H568 366 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 FAF1Q9UNN5 650 aaPredicted RBP13.08□□□□□ -0.32
MCF2L-213ENST00000421756 PCDHA9Q9Y5H5 950 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 hCG_2039718K7EN88 272 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 XPAP23025 273 aaPredicted RBP13.08□□□□□ -0.32
MCF2L-213ENST00000421756 ADARP55265 1226 aaKnown RBP13.08□□□□□ -0.32
MCF2L-213ENST00000421756 NFKB2Q00653 900 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 XKR5Q6UX68 686 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 ZNF621Q6ZSS3 439 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 GPR141Q7Z602 305 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 ADAMTSL2Q86TH1 951 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 AHI1Q8N157 1196 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 PXYLP1Q8TE99 480 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 CENPNQ96H22 339 aaPredicted RBP13.08□□□□□ -0.32
MCF2L-213ENST00000421756 ZNF597Q96LX8 424 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 ASB2Q96Q27 587 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 GPATCH1Q9BRR8 931 aaKnown RBP13.08□□□□□ -0.32
MCF2L-213ENST00000421756 CLK4Q9HAZ1 481 aaKnown RBP13.08□□□□□ -0.32
MCF2L-213ENST00000421756 TBC1D30Q9Y2I9 924 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 NLRC5Q86WI3 1866 aa13.08□□□□□ -0.32
MCF2L-213ENST00000421756 TMEM202A6NGA9 273 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 PER2O15055 1255 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 TBC1D4O60343 1298 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 STK16O75716 305 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 FKBP9O95302 570 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 OTCP00480 354 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 ESRRGP62508 458 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 PTCHD3Q3KNS1 767 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 NHSL2Q5HYW2 709 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 PLPP4Q5VZY2 271 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 FKBP9P1Q75LS8 142 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 DDX53Q86TM3 631 aaKnown RBP13.07□□□□□ -0.32
MCF2L-213ENST00000421756 PLD4Q96BZ4 506 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 COPS8Q99627 209 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 LRTM1Q9HBL6 345 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 EIF3LQ9Y262 564 aaKnown RBP13.07□□□□□ -0.32
MCF2L-213ENST00000421756 TDRKHQ9Y2W6 561 aaKnown RBP13.07□□□□□ -0.32
MCF2L-213ENST00000421756 COQ6Q9Y2Z9 468 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms