RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 IP6K3Q96PC2 410 aa16.36■□□□□ 0.21
UPF3AP3-201ENST00000420996 QKIQ96PU8 341 aaKnown RBP eCLIP16.36■□□□□ 0.21
UPF3AP3-201ENST00000420996 FERD3LQ96RJ6 166 aa16.36■□□□□ 0.21
UPF3AP3-201ENST00000420996 CHP1Q99653 195 aa16.36■□□□□ 0.21
UPF3AP3-201ENST00000420996 PITPNM3Q9BZ71 974 aa16.36■□□□□ 0.21
UPF3AP3-201ENST00000420996 SLC7A5P2Q9GIP4 190 aa16.36■□□□□ 0.21
UPF3AP3-201ENST00000420996 SPTLC3Q9NUV7 552 aa16.36■□□□□ 0.21
UPF3AP3-201ENST00000420996 FKBPLQ9UIM3 349 aa16.36■□□□□ 0.21
UPF3AP3-201ENST00000420996 CCDC88CQ9P219 2028 aa16.36■□□□□ 0.21
UPF3AP3-201ENST00000420996 WIPF3A6NGB9 483 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 E7EQ34 232 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 BTN3A3O00478 584 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 BTN3A1O00481 513 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 PSTPIP1O43586 416 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 ANXA9O76027 345 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 AGXTP21549 392 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 HADHAP40939 763 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 LMAN1P49257 510 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 XIAPP98170 497 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 TRIM14Q14142 442 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 VWA5B1Q5TIE3 1220 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 RANBP10Q6VN20 620 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 MAMDC2Q7Z304 686 aaPredicted RBP16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 HEXDCQ8WVB3 486 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 ULK4Q96C45 1275 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 SNRNP40Q96DI7 357 aaKnown RBP16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 C19orf60Q96EN9 201 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 CCDC42Q96M95 316 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 TRAPPC9Q96Q05 1148 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 DHRS4Q9BTZ2 278 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 FICDQ9BVA6 458 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 GBA3Q9H227 469 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 TFB2MQ9H5Q4 396 aaKnown RBP16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 NHEJ1Q9H9Q4 299 aaPredicted RBP16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 CRLS1Q9UJA2 301 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 INTUQ9ULD6 942 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 PADI2Q9Y2J8 665 aa16.35■□□□□ 0.21
UPF3AP3-201ENST00000420996 hCG_1818297A0A087WSY0 165 aa16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 CCDC66A2RUB6 948 aa16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 ZNF749O43361 778 aa16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 KLF7O75840 302 aaPredicted RBP16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 ATP1B2P14415 290 aaPredicted RBP16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 SSPNQ14714 243 aa16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 PLEKHN1Q494U1 663 aaPredicted RBP16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 ZNF385CQ66K41 422 aaPredicted RBP16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 RCOR2Q8IZ40 523 aa16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 IQCKQ8N0W5 287 aa16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 NXPE1Q8N323 547 aa16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 RBM41Q96IZ5 413 aaKnown RBP16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 C19orf43Q9BQ61 176 aa16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 C17orf62Q9BQA9 187 aa16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 OR52A5Q9H2C5 316 aa16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 MVB12BQ9H7P6 319 aa16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 COG4Q9H9E3 785 aa16.34■□□□□ 0.21
UPF3AP3-201ENST00000420996 FER1L5A0AVI2 2057 aa16.33■□□□□ 0.21
UPF3AP3-201ENST00000420996 C2orf74A8MZ97 194 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 CFAP99D6REC4 459 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 IFRD1O00458 451 aaPredicted RBP16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 KRT86O43790 486 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 ZRANB2O95218 330 aaKnown RBP eCLIP16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 CBX6O95503 412 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 CRTAMO95727 393 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 LDLRP01130 860 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 PVRP15151 417 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 OTX2P32243 289 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 ADRA1AP35348 466 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 CD151P48509 253 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 RAPSNQ13702 412 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 NR6A1Q15406 480 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 SARM1Q6SZW1 724 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 CDHR3Q6ZTQ4 885 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 AMIGO1Q86WK6 493 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 GPR135Q8IZ08 494 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 ADGRF3Q8IZF5 1079 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 OR52E1Q8NGJ3 308 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 HAUS1Q96CS2 278 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 TCTN2Q96GX1 697 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 FER1L6-AS2Q96M78 137 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 COPS8Q99627 209 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 GORASP1Q9BQQ3 440 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 ABHD10Q9NUJ1 306 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 ASF1BQ9NVP2 202 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 ERRFI1Q9UJM3 462 aaPredicted RBP16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 B3GNT3Q9Y2A9 372 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 ALG6Q9Y672 507 aa16.33■□□□□ 0.2
UPF3AP3-201ENST00000420996 ENO4A6NNW6 628 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 KLHL41O60662 606 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 CLDN1O95832 211 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 IGHEP01854 428 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 ALPPP05187 535 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 CD63P08962 238 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 ITGALP20701 1170 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 COL8A1P27658 744 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 RBL1P28749 1068 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 RPA4Q13156 261 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 MSLNQ13421 630 aaPredicted RBP16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 KYNUQ16719 465 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 ZNF658BQ4V348 819 aaPredicted RBP16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 ZNF787Q6DD87 383 aa16.32■□□□□ 0.2
UPF3AP3-201ENST00000420996 ITPRIPL1Q6GPH6 555 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms