RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 VWA3BQ502W6 1294 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 ANKRD20A8PQ5CZ79 823 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 ZNF648Q5T619 568 aaPredicted RBP8.67□□□□□ -1.02
TRIM39-206ENST00000420746 ATG9BQ674R7 924 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 TMEM211Q6ICI0 200 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 OVCH1Q7RTY7 1134 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 HRNRQ86YZ3 2850 aaPredicted RBP8.67□□□□□ -1.02
TRIM39-206ENST00000420746 TMEM151BQ8IW70 566 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 GHDCQ8N2G8 530 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 TRAM1L1Q8N609 369 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 NPWQ8N729 165 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 GOT1L1Q8NHS2 421 aaPredicted RBP8.67□□□□□ -1.02
TRIM39-206ENST00000420746 N4BP2L2Q92802 583 aaPredicted RBP8.67□□□□□ -1.02
TRIM39-206ENST00000420746 RNF25Q96BH1 459 aaPredicted RBP8.67□□□□□ -1.02
TRIM39-206ENST00000420746 SMIM14Q96QK8 99 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 NUP85Q9BW27 656 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 SPATA16Q9BXB7 569 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 NEUROD4Q9HD90 331 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 ARFGAP3Q9NP61 516 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 SLC22A11Q9NSA0 550 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 IMP3Q9NV31 184 aaKnown RBP8.67□□□□□ -1.02
TRIM39-206ENST00000420746 PTGFRNQ9P2B2 879 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 DHCR7Q9UBM7 475 aaKnown RBP8.67□□□□□ -1.02
TRIM39-206ENST00000420746 L3MBTL1Q9Y468 752 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 CUBNO60494 3623 aa8.67□□□□□ -1.02
TRIM39-206ENST00000420746 INTS1Q8N201 2190 aaKnown RBP8.66□□□□□ -1.02
TRIM39-206ENST00000420746 HCFC1P51610 2035 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 A0A1W2PQ72 361 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 GTPBP10A4D1E9 387 aaKnown RBP8.66□□□□□ -1.02
TRIM39-206ENST00000420746 NKX2-6A6NCS4 301 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 ASPDHA6ND91 283 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 EEF2KO00418 725 aaKnown RBP8.66□□□□□ -1.02
TRIM39-206ENST00000420746 CRLF1O75462 422 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 BMP10O95393 424 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 WDPCPO95876 746 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 NEFLP07196 543 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 PRR35P0CG20 571 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 KRT3P12035 628 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 ERCC2P18074 760 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 SLC9A1P19634 815 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 CA4P22748 312 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 CES1P23141 567 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 PEX19P40855 299 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 MMP13P45452 471 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 ZNF135P52742 658 aaPredicted RBP8.66□□□□□ -1.02
TRIM39-206ENST00000420746 AP2B1P63010 937 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 PMP22Q01453 160 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 ALDH6A1Q02252 535 aaKnown RBP8.66□□□□□ -1.02
TRIM39-206ENST00000420746 XRCC4Q13426 336 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 NKG7Q16617 165 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 EXOC3L4Q17RC7 722 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 NAA35Q5VZE5 725 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 ALG1LQ6GMV1 187 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 SCYL2Q6P3W7 929 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 GBP6Q6ZN66 633 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 RIPOR1Q6ZS17 1223 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 RFX8Q6ZV50 586 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 AMZ2Q86W34 360 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 CDC20BQ86Y33 519 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 TRAPPC5Q8IUR0 188 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 CHERPQ8IWX8 916 aaKnown RBP8.66□□□□□ -1.02
TRIM39-206ENST00000420746 BEND7Q8N7W2 519 aaPredicted RBP8.66□□□□□ -1.02
TRIM39-206ENST00000420746 BRIX1Q8TDN6 353 aaKnown RBP8.66□□□□□ -1.02
TRIM39-206ENST00000420746 DENND1AQ8TEH3 1009 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 NSMCE1Q8WV22 266 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 CPA5Q8WXQ8 436 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 DLG3Q92796 817 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 HDAC10Q969S8 669 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 VPS35Q96QK1 796 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 GPATCH1Q9BRR8 931 aaKnown RBP8.66□□□□□ -1.02
TRIM39-206ENST00000420746 CRACR2AQ9BSW2 395 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 TDRD1Q9BXT4 1180 aaKnown RBP8.66□□□□□ -1.02
TRIM39-206ENST00000420746 XPO4Q9C0E2 1151 aaKnown RBP8.66□□□□□ -1.02
TRIM39-206ENST00000420746 ZNF160Q9HCG1 818 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 LRFN1Q9P244 771 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 DNMT3AQ9Y6K1 912 aaPredicted RBP8.66□□□□□ -1.02
TRIM39-206ENST00000420746 ANKRD12Q6UB98 2062 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 ZANQ9Y493 2812 aa8.66□□□□□ -1.02
TRIM39-206ENST00000420746 VSTM2BA6NLU5 285 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 FAM90A27PA6NNH2 459 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 MAP2K7O14733 419 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 CCP110O43303 1012 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 ASNA1O43681 348 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 PRLP01236 227 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 SERPINA7P05543 415 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 TPOP07202 933 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 ACPPP15309 386 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 GCGRP47871 477 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 GABRA4P48169 554 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 CARSP49589 748 aaKnown RBP8.65□□□□□ -1.02
TRIM39-206ENST00000420746 ZNF143P52747 638 aaPredicted RBP8.65□□□□□ -1.02
TRIM39-206ENST00000420746 GTF2H3Q13889 308 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 KEAP1Q14145 624 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 ZNF766Q5HY98 468 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 MARC1Q5VT66 337 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 METRNLQ641Q3 311 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 HIBCHQ6NVY1 386 aaPredicted RBP8.65□□□□□ -1.02
TRIM39-206ENST00000420746 SIAH3Q8IW03 269 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 FAM20CQ8IXL6 584 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 BRSK1Q8TDC3 778 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms