RNA–Protein interactions for RNA: ENST00000419020.1

DDX39B-205, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-205ENST00000419020 PRAMEF1O95521 474 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 WDPCPO95876 746 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 HLA-DPA1P20036 260 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 CTSCP53634 463 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 TMPRSS15P98073 1019 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 XRCC4Q13426 336 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 STIM1Q13586 685 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 RBBP7Q16576 425 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 NKG7Q16617 165 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 DEFB110Q30KQ9 67 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 KRTCAP3Q53RY4 240 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 KRTAP1-3Q8IUG1 177 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 SIRT6Q8N6T7 355 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 ZNF655Q8N720 491 aaPredicted RBP11.15□□□□□ -0.62
DDX39B-205ENST00000419020 GPR26Q8NDV2 337 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 LPCAT1Q8NF37 534 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 LILRB4Q8NHJ6 448 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 SLC30A5Q8TAD4 765 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 CCDC110Q8TBZ0 833 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 CCHCR1Q8TD31 782 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 BRIX1Q8TDN6 353 aaKnown RBP11.15□□□□□ -0.62
DDX39B-205ENST00000419020 SLC20A1Q8WUM9 679 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 N4BP2L2Q92802 583 aaPredicted RBP11.15□□□□□ -0.62
DDX39B-205ENST00000419020 INSM2Q96T92 566 aaPredicted RBP11.15□□□□□ -0.62
DDX39B-205ENST00000419020 GPATCH1Q9BRR8 931 aaKnown RBP11.15□□□□□ -0.62
DDX39B-205ENST00000419020 CLEC4MQ9H2X3 399 aaPredicted RBP11.15□□□□□ -0.62
DDX39B-205ENST00000419020 DHX35Q9H5Z1 703 aaKnown RBP11.15□□□□□ -0.62
DDX39B-205ENST00000419020 KIR3DX1Q9H7L2 352 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 MRM3Q9HC36 420 aaKnown RBP11.15□□□□□ -0.62
DDX39B-205ENST00000419020 FAM60AQ9NP50 221 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 NT5MQ9NPB1 228 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 TXLNGQ9NUQ3 528 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 EDARQ9UNE0 448 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 AP4E1Q9UPM8 1137 aa11.15□□□□□ -0.62
DDX39B-205ENST00000419020 MRPS2Q9Y399 296 aaKnown RBP11.15□□□□□ -0.62
DDX39B-205ENST00000419020 FAM237BA0A1B0GVD1 139 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 GADD45BO75293 160 aaPredicted RBP11.14□□□□□ -0.63
DDX39B-205ENST00000419020 HPP00738 406 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 ABOP16442 354 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 ITGAXP20702 1163 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 ZNF143P52747 638 aaPredicted RBP11.14□□□□□ -0.63
DDX39B-205ENST00000419020 KRT85P78386 507 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 PPP2R2BQ00005 443 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 PTP4A2Q12974 167 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 NFE2L1Q14494 772 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 DEFB113Q30KQ7 82 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 MARC1Q5VT66 337 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 ISM2Q6H9L7 571 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 OVCH1Q7RTY7 1134 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 AMZ2Q86W34 360 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 CHERPQ8IWX8 916 aaKnown RBP11.14□□□□□ -0.63
DDX39B-205ENST00000419020 KBTBD2Q8IY47 623 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.14□□□□□ -0.631e-21■□□□□ 9.9
DDX39B-205ENST00000419020 TRAM1L1Q8N609 369 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 SUN3Q8TAQ9 357 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 NELFBQ8WX92 580 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 FKBP10Q96AY3 582 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 C12orf66Q96MD2 445 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 KCTD15Q96SI1 283 aaPredicted RBP11.14□□□□□ -0.63
DDX39B-205ENST00000419020 NAA15Q9BXJ9 866 aaKnown RBP11.14□□□□□ -0.63
DDX39B-205ENST00000419020 TDRD1Q9BXT4 1180 aaKnown RBP11.14□□□□□ -0.63
DDX39B-205ENST00000419020 SOX17Q9H6I2 414 aaPredicted RBP11.14□□□□□ -0.63
DDX39B-205ENST00000419020 WDR54Q9H977 334 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 SLC24A3Q9HC58 644 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 STMN3Q9NZ72 180 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 ANK2Q01484 3957 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 CPAMD8Q8IZJ3 1885 aa11.14□□□□□ -0.63
DDX39B-205ENST00000419020 MATN2O00339 956 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 KCNJ13O60928 360 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 POP7O75817 140 aaKnown RBP11.13□□□□□ -0.63
DDX39B-205ENST00000419020 TSPAN12O95859 305 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 CYP1A1P04798 512 aaPredicted RBP11.13□□□□□ -0.63
DDX39B-205ENST00000419020 PRR35P0CG20 571 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 PYGMP11217 842 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 GABRA4P48169 554 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 DCDC1P59894 354 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 ITKQ08881 620 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 TMEM115Q12893 351 aaPredicted RBP11.13□□□□□ -0.63
DDX39B-205ENST00000419020 OLIG2Q13516 323 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 PPP1R15BQ5SWA1 713 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 PDPK2PQ6A1A2 396 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 CEP128Q6ZU80 1094 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 MARVELD2Q8N4S9 558 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 SPDYE1Q8NFV5 336 aaPredicted RBP11.13□□□□□ -0.63
DDX39B-205ENST00000419020 VPS50Q96JG6 964 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 NRTNQ99748 197 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 SELENOOQ9BVL4 669 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 WWP1Q9H0M0 922 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 DEF6Q9H4E7 631 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 ZFYVE1Q9HBF4 777 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 KCNJ16Q9NPI9 418 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 RASSF1Q9NS23 344 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 SEPT11Q9NVA2 429 aaKnown RBP11.13□□□□□ -0.63
DDX39B-205ENST00000419020 IL17CQ9P0M4 197 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 TMPRSS11EQ9UL52 423 aa11.13□□□□□ -0.63
DDX39B-205ENST00000419020 GTPBP10A4D1E9 387 aaKnown RBP11.12□□□□□ -0.63
DDX39B-205ENST00000419020 OR5H15A6NDH6 313 aa11.12□□□□□ -0.63
DDX39B-205ENST00000419020 NPIPA5E9PKD4 350 aa11.12□□□□□ -0.63
DDX39B-205ENST00000419020 BTN3A3O00478 584 aa11.12□□□□□ -0.63
DDX39B-205ENST00000419020 BTN3A1O00481 513 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms