RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 TFGQ92734 400 aaPredicted RBP20.05■□□□□ 0.8
PKNOX1-202ENST00000418336 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.05■□□□□ 0.8
PKNOX1-202ENST00000418336 SIGLEC10Q96LC7 697 aa20.05■□□□□ 0.8
PKNOX1-202ENST00000418336 CCNL2Q96S94 520 aaPredicted RBP20.05■□□□□ 0.8
PKNOX1-202ENST00000418336 ASPSCR1Q9BZE9 553 aa20.05■□□□□ 0.8
PKNOX1-202ENST00000418336 MVB12BQ9H7P6 319 aa20.05■□□□□ 0.8
PKNOX1-202ENST00000418336 HRASLS2Q9NWW9 162 aa20.05■□□□□ 0.8
PKNOX1-202ENST00000418336 TMEM184BQ9Y519 407 aaPredicted RBP20.05■□□□□ 0.8
PKNOX1-202ENST00000418336 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.05■□□□□ 0.83e-6■■■■□ 21.7
PKNOX1-202ENST00000418336 COLEC10Q9Y6Z7 277 aa20.05■□□□□ 0.8
PKNOX1-202ENST00000418336 OR6C74A6NCV1 312 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 GOLGA8KD6RF30 607 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 GOLGA8TH3BQL2 631 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 PRMT5O14744 637 aaPredicted RBP20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 TP73O15350 636 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 ZNF28P17035 718 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 AOAHP28039 575 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 VAC14Q08AM6 782 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 GSE1Q14687 1217 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 BRD3Q15059 726 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 PLCL1Q15111 1095 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 AARS2Q5JTZ9 985 aaKnown RBP20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 ARHGAP40Q5TG30 622 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 TMEM164Q5U3C3 297 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 BROXQ5VW32 411 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 GPR155Q7Z3F1 870 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 VASH2Q86V25 355 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 SLC22A15Q8IZD6 547 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 ADGRF3Q8IZF5 1079 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 KRT222Q8N1A0 295 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 OR4E2Q8NGC2 313 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 FLVCR1-AS1Q8TAF5 88 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 TEFMQ96QE5 360 aaKnown RBP20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 FERD3LQ96RJ6 166 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 CD180Q99467 661 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 MENTQ9BUN1 341 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 PLAC1Q9HBJ0 212 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 IL1RAPL1Q9NZN1 696 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 POMT2Q9UKY4 750 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 ICKQ9UPZ9 632 aa20.04■□□□□ 0.8
PKNOX1-202ENST00000418336 FAM237BA0A1B0GVD1 139 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 TLCD2A6NGC4 264 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 GOLGA8MH3BSY2 632 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 BTN3A1O00481 513 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 TIAF1O95411 115 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 FGF5P12034 268 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 FOLR1P15328 257 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 ITGB6P18564 788 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 PPM1FP49593 454 aaPredicted RBP20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 TTPAP49638 278 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 GRB7Q14451 532 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 ANKRD20A4Q4UJ75 823 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 ZNF789Q5FWF6 425 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 FBXO38Q6PIJ6 1188 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 CENPUQ71F23 418 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 D2HGDHQ8N465 521 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 GRK7Q8WTQ7 553 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 UBXN4Q92575 508 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 TTC9Q92623 222 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 ANP32BQ92688 251 aaKnown RBP20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 NAPGQ99747 312 aaPredicted RBP20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 ZPBPQ9BS86 351 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 PITPNM3Q9BZ71 974 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 XKR8Q9H6D3 395 aa20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 XAB2Q9HCS7 855 aaKnown RBP20.03■□□□□ 0.8
PKNOX1-202ENST00000418336 GOLGA6L10A0A0M3HER8 536 aa20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 TEX51A0A1B0GUA7 166 aa20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 IFRD1O00458 451 aaPredicted RBP20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 DNALI1O14645 258 aaPredicted RBP20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 SLCO2B1O94956 709 aa20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 F7P08709 466 aaPredicted RBP20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 ADARP55265 1226 aaKnown RBP20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 GBX1Q14549 363 aa20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 KCNAB1Q14722 419 aa20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 DNTTIP2Q5QJE6 756 aaKnown RBP20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 KLHL35Q6PF15 583 aa20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 CEACAM20Q6UY09 585 aa20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 OOSP2Q86WS3 158 aa20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 PPIL6Q8IXY8 311 aa20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 C17orf53Q8N3J3 647 aaPredicted RBP20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 OR5K2Q8NHB8 316 aa20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 OR6C1Q96RD1 312 aa20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 WDR83Q9BRX9 315 aaKnown RBP20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 HGH1Q9BTY7 390 aa20.02■□□□□ 0.8
PKNOX1-202ENST00000418336 SDR42E2A6NKP2 422 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 POLR1CO15160 346 aaPredicted RBP20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 RAD1O60671 282 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 RASSF9O75901 435 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 POLR2CP19387 275 aaPredicted RBP20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 SARNPP82979 210 aaKnown RBP20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 PLOD1Q02809 727 aaPredicted RBP20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 PRKG2Q13237 762 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 MSS51Q4VC12 460 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 KIAA1614Q5VZ46 1190 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 KMT5CQ86Y97 462 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 CILP2Q8IUL8 1156 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 TBC1D21Q8IYX1 336 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 CARFQ8N187 725 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 LCN9Q8WX39 176 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 CAPZA3Q96KX2 299 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms