RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 ESX1Q8N693 406 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 TERB1Q8NA31 727 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 ZBTB34Q8NCN2 500 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 SLC30A5Q8TAD4 765 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 OLIG1Q8TAK6 271 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 PPP1R35Q8TAP8 253 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 IFT81Q8WYA0 676 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 CENPTQ96BT3 561 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 C18orf8Q96DM3 657 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 SLC39A13Q96H72 371 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 PCDHB18PQ96TA0 734 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 AGPAT1Q99943 283 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 C11orf70Q9BRQ4 267 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 SYT11Q9BT88 431 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 CCDC28BQ9BUN5 200 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 BBS2Q9BXC9 721 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 XPO4Q9C0E2 1151 aaKnown RBP4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 SLC7A5P2Q9GIP4 190 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 YIPF3Q9GZM5 350 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 WDR26Q9H7D7 661 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 FAM204AQ9H8W3 233 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 CLK4Q9HAZ1 481 aaKnown RBP4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 SEPT11Q9NVA2 429 aaKnown RBP4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 DNAJC17Q9NVM6 304 aaKnown RBP4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 PNPOQ9NVS9 261 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 C2orf42Q9NWW7 574 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 DDIT4Q9NX09 232 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 DEC1Q9P2X7 70 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 CTNNAL1Q9UBT7 734 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 XPO7Q9UIA9 1087 aaKnown RBP4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 SATB2Q9UPW6 733 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 C15orf41Q9Y2V0 281 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 NOSIPQ9Y314 301 aaKnown RBP4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 CEP192Q8TEP8 1941 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 PLXND1Q9Y4D7 1925 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 AKAP13Q12802 2813 aa4.89□□□□□ -1.63
ATG4AP1-201ENST00000416893 RP1L1Q8IWN7 2480 aaPredicted RBP4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 BPTFQ12830 3046 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 SHROOM3Q8TF72 1996 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 CHD6Q8TD26 2715 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 TRGV11A0A075B6L2 103 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 SYNJ2BP-COX16A0A087WUM0 186 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 TBC1D3BA6NDS4 549 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 ANTXRLA6NF34 631 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 PRSS29PA6NIE9 313 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 BOLA2-SMG1P6H3BVE0 249 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 K7EQS6 105 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 ACSL4O60488 711 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 TSPAN3O60637 253 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 SKAP2O75563 359 aaPredicted RBP4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 TUSC2O75896 110 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 AGFG2O95081 481 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 PAPSS2O95340 614 aaPredicted RBP4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 MATN4O95460 622 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 APOEP02649 317 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 GYPCP04921 128 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 CALB1P05937 261 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 LINGO3P0C6S8 592 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 SP9P0CG40 484 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 TDGF1P13385 188 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 CPA3P15088 417 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 HTR1BP28222 390 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 HOXD9P28356 352 aaPredicted RBP4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 CD38P28907 300 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 HOXC13P31276 330 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 MPLP40238 635 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 PRKCIP41743 596 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 MATKP42679 507 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 PIK3CGP48736 1102 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 SLC11A2P49281 568 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 CCR3P51677 355 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 SGSHP51688 502 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 RAB1AP62820 205 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 BASP1P80723 227 aaKnown RBP4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 CSTF1Q05048 431 aaKnown RBP4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 ZNF844Q08AG5 666 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 KLHL30Q0D2K2 578 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 KIF5AQ12840 1032 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 PTP4A2Q12974 167 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 XRCC4Q13426 336 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 EIF4EBP2Q13542 120 aaPredicted RBP4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 ASIC2Q16515 512 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 BEND6Q5SZJ8 279 aaPredicted RBP4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 SP5Q6BEB4 398 aaPredicted RBP4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 TRNP1Q6NT89 227 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 NEPROQ6NW34 567 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 CYB5D1Q6P9G0 228 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 C3orf62Q6ZUJ4 267 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 MON1BQ7L1V2 547 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 NLRP9Q7RTR0 991 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 ZNF571Q7Z3V5 609 aaPredicted RBP4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 PHLDB2Q86SQ0 1253 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 DAAM2Q86T65 1068 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 PPP1R3BQ86XI6 285 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 PHF13Q86YI8 300 aaPredicted RBP4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 UNC45BQ8IWX7 931 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 CHCHD4Q8N4Q1 142 aa4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 RNF10Q8N5U6 811 aaKnown RBP4.88□□□□□ -1.63
ATG4AP1-201ENST00000416893 CFAP61Q8NHU2 1237 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms