RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 ZDHHC14Q8IZN3 488 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 TRAM1L1Q8N609 369 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 ZNF513Q8N8E2 541 aaPredicted RBP11.77□□□□□ -0.53
PTPRF-205ENST00000414879 CAMKVQ8NCB2 501 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 MARK4Q96L34 752 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 TMEM209Q96SK2 561 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 ZSCAN32Q9NX65 697 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 WNT6Q9Y6F9 365 aa11.77□□□□□ -0.53
PTPRF-205ENST00000414879 OR5K4A6NMS3 321 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 ADAMDEC1O15204 470 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 SLC31A1O15431 190 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 OR1F1O43749 312 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 PIAS1O75925 651 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 HOXD8P13378 290 aaPredicted RBP11.76□□□□□ -0.53
PTPRF-205ENST00000414879 RABGGTBP53611 331 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 UBXN2BQ14CS0 331 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 CHST15Q7LFX5 561 aaPredicted RBP11.76□□□□□ -0.53
PTPRF-205ENST00000414879 EPHX4Q8IUS5 362 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 KIAA2013Q8IYS2 634 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 NXPE1Q8N323 547 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 TMEM40Q8WWA1 233 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 CMTM7Q96FZ5 175 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 TRMT2BQ96GJ1 504 aaKnown RBP11.76□□□□□ -0.53
PTPRF-205ENST00000414879 REXO5Q96IC2 774 aaKnown RBP11.76□□□□□ -0.53
PTPRF-205ENST00000414879 TMEM27Q9HBJ8 222 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 ARL8BQ9NVJ2 186 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 SUCOQ9UBS9 1254 aaKnown RBP11.76□□□□□ -0.53
PTPRF-205ENST00000414879 LZTS1Q9Y250 596 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 WASH4PA8MWX3 477 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 TEX28O15482 410 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 VEGFDO43915 354 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 MPZL2O60487 215 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 STC2O76061 302 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 EBLN1P0CF75 366 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 PSMB9P28065 219 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 ELAVL3Q14576 367 aaKnown RBP11.76□□□□□ -0.53
PTPRF-205ENST00000414879 DGUOKQ16854 277 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 GLYATQ6IB77 296 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 TYW3Q6IPR3 259 aaKnown RBP11.76□□□□□ -0.53
PTPRF-205ENST00000414879 HID1Q8IV36 788 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 MMAAQ8IVH4 418 aaKnown RBP11.76□□□□□ -0.53
PTPRF-205ENST00000414879 DCUN1D3Q8IWE4 304 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 SLC39A11Q8N1S5 342 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 SVOPLQ8N434 492 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 TEX47Q8TBZ9 253 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 TOP1MTQ969P6 601 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 PTPN18Q99952 460 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 RACGAP1Q9H0H5 632 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 DPEP2Q9H4A9 486 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 FBXL12Q9NXK8 326 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 GJD2Q9UKL4 321 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 POLR1DQ9Y2S0 133 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 TRIM24O15164 1050 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 BCL10O95999 233 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 LEPRP48357 1165 aaKnown RBP11.76□□□□□ -0.53
PTPRF-205ENST00000414879 SEC13P55735 322 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 PLA2G4EQ3MJ16 856 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 PEX5LQ8IYB4 626 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 RHEBL1Q8TAI7 183 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 FIBINQ8TAL6 211 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 P2RY13Q9BPV8 354 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 HHATLQ9HCP6 504 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 MYH11P35749 1972 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 MED26O95402 600 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 TSPAN19P0C672 248 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 SYN1P17600 705 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 SP100P23497 879 aaPredicted RBP11.76□□□□□ -0.53
PTPRF-205ENST00000414879 EEFSECP57772 596 aaKnown RBP11.76□□□□□ -0.53
PTPRF-205ENST00000414879 PRAMEF14Q5SWL7 426 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 PRAMEF13Q5VWM6 474 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 SPESP1Q6UW49 350 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 ERN2Q76MJ5 926 aaKnown RBP11.76□□□□□ -0.53
PTPRF-205ENST00000414879 GATAD2AQ86YP4 633 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 ZNF781Q8N8C0 355 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 POMGNT2Q8NAT1 580 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 MAGEE2Q8TD90 523 aaPredicted RBP11.76□□□□□ -0.53
PTPRF-205ENST00000414879 SLC13A3Q8WWT9 602 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 VPS35Q96QK1 796 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 RBM4BQ9BQ04 359 aaKnown RBP11.76□□□□□ -0.53
PTPRF-205ENST00000414879 RBM4Q9BWF3 364 aaKnown RBP11.76□□□□□ -0.53
PTPRF-205ENST00000414879 CACNG4Q9UBN1 327 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 SEC14L3Q9UDX4 400 aa11.76□□□□□ -0.53
PTPRF-205ENST00000414879 UGT2B17O75795 530 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 MFN2O95140 757 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 OXTRP30559 389 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 KHKP50053 298 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 NR1H2P55055 460 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 OLR1P78380 273 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 SLC9A5Q14940 896 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 TMEM44Q2T9K0 475 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 EIPR1Q53HC9 387 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 MARCH8Q5T0T0 291 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 ABHD13Q7L211 337 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 GKN2Q86XP6 184 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 SCAIQ8N9R8 606 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 KLHDC9Q8NEP7 349 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 BADQ92934 168 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 RGMAQ96B86 450 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 SMIM31A0A1B0GVY4 71 aa11.75□□□□□ -0.53
PTPRF-205ENST00000414879 PIP5K1BO14986 540 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms