RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	MYF5	P13349	255 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	PNLIP	P16233	465 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	ACP1	P24666	158 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	CNTF	P26441	200 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	NDUFS1	P28331	727 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	HSD17B3	P37058	310 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	SLC19A1	P41440	591 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	NOVA1	P51513	510 aa	Known RBP	12.85	□□□□□ -0.35
SF1-206	ENST00000413725	UBE2I	P63279	158 aa	Known RBP	12.85	□□□□□ -0.35
SF1-206	ENST00000413725	GBX1	Q14549	363 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	USP10	Q14694	798 aa	Known RBP	12.85	□□□□□ -0.35
SF1-206	ENST00000413725	ACSBG2	Q5FVE4	666 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	GUSBP11	Q6P575	273 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	NEK10	Q6ZWH5	1172 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	EFL1	Q7Z2Z2	1120 aa	Known RBP	12.85	□□□□□ -0.35
SF1-206	ENST00000413725	PIM3	Q86V86	326 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	VRK3	Q8IV63	474 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	CNPY4	Q8N129	248 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.85	□□□□□ -0.35
SF1-206	ENST00000413725	GIMAP7	Q8NHV1	300 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	IFI44	Q8TCB0	444 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	TFG	Q92734	400 aa	Predicted RBP	12.85	□□□□□ -0.35
SF1-206	ENST00000413725	INSM2	Q96T92	566 aa	Predicted RBP	12.85	□□□□□ -0.35
SF1-206	ENST00000413725	OLFM1	Q99784	485 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	12.85	□□□□□ -0.35
SF1-206	ENST00000413725	MVB12B	Q9H7P6	319 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	PPCS	Q9HAB8	311 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	POPDC3	Q9HBV1	291 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	LRIT1	Q9P2V4	623 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	GALP	Q9UBC7	116 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	FETUB	Q9UGM5	382 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	ZNF180	Q9UJW8	692 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	ASF1A	Q9Y294	204 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	MTO1	Q9Y2Z2	717 aa	Known RBP	12.85	□□□□□ -0.35
SF1-206	ENST00000413725	CFAP20	Q9Y6A4	193 aa	Known RBP	12.85	□□□□□ -0.35
SF1-206	ENST00000413725	RNF215	Q9Y6U7	377 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725		U3KQA8	63 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	HEATR5B	Q9P2D3	2071 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	SPTBN2	O15020	2390 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	KIF26B	Q2KJY2	2108 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	CCDC151	A5D8V7	595 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	CTIF	O43310	598 aa	Known RBP	12.84	□□□□□ -0.35
SF1-206	ENST00000413725	KRT38	O76015	456 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	GP1BA	P07359	652 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	MPC1L	P0DKB6	136 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	STMN1	P16949	149 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	ACADL	P28330	430 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	MAPK9	P45984	424 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	GPR3	P46089	330 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	ACADVL	P49748	655 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	TAS2R39	P59534	338 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	IL2	P60568	153 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
SF1-206	ENST00000413725	DNAJC3	Q13217	504 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	ILK	Q13418	452 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	12.84	□□□□□ -0.35
SF1-206	ENST00000413725	LGSN	Q5TDP6	509 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	MROH9	Q5TGP6	573 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	DUS1L	Q6P1R4	473 aa	Known RBP	12.84	□□□□□ -0.35
SF1-206	ENST00000413725	PAQR3	Q6TCH7	311 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	UNC5D	Q6UXZ4	953 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	ZNF438	Q7Z4V0	828 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	CPNE9	Q8IYJ1	553 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	MREG	Q8N565	214 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	MYRIP	Q8NFW9	859 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	CFAP61	Q8NHU2	1237 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	ZFPM2	Q8WW38	1151 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	CCDC74A	Q96AQ1	378 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	FERD3L	Q96RJ6	166 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	SLC38A3	Q99624	504 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	SLC30A3	Q99726	388 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	TRIT1	Q9H3H1	467 aa	Known RBP	12.84	□□□□□ -0.35
SF1-206	ENST00000413725	UCK1	Q9HA47	277 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	SYTL2	Q9HCH5	934 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	SLC24A2	Q9UI40	661 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	TSR3	Q9UJK0	312 aa	Known RBP	12.84	□□□□□ -0.35
SF1-206	ENST00000413725	PCDHGA1	Q9Y5H4	931 aa		12.84	□□□□□ -0.35
SF1-206	ENST00000413725	PPM1D	O15297	605 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	KDM1A	O60341	852 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	RFPL3	O75679	317 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	KRT37	O76014	449 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	CDK4	P11802	303 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	PPM1F	P49593	454 aa	Predicted RBP	12.83	□□□□□ -0.36
SF1-206	ENST00000413725	SERPINB8	P50452	374 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	RAB10	P61026	200 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	ABR	Q12979	859 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	PUM1	Q14671	1186 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
SF1-206	ENST00000413725	PLCL1	Q15111	1095 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	TTC23L	Q6PF05	361 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	TMEM26	Q6ZUK4	368 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	TBC1D21	Q8IYX1	336 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	MYO1H	Q8N1T3	1032 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	NKAP	Q8N5F7	415 aa	Known RBP	12.83	□□□□□ -0.36
SF1-206	ENST00000413725	ACVR1C	Q8NER5	493 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	MAGEC3	Q8TD91	643 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	DCAKD	Q8WVC6	231 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	LINGO1	Q96FE5	620 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	KIR3DX1	Q9H7L2	352 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	CAB39L	Q9H9S4	337 aa		12.83	□□□□□ -0.36
SF1-206	ENST00000413725	GPAM	Q9HCL2	828 aa		12.83	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms