RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 SLC13A1Q9BZW2 595 aa9.39□□□□□ -0.91
SOX9-AS1-201ENST00000412640 RDH14Q9HBH5 336 aa9.39□□□□□ -0.91
SOX9-AS1-201ENST00000412640 NOD2Q9HC29 1040 aa9.39□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PPANQ9NQ55 473 aaKnown RBP9.39□□□□□ -0.91
SOX9-AS1-201ENST00000412640 C20orf96Q9NUD7 363 aaPredicted RBP9.39□□□□□ -0.91
SOX9-AS1-201ENST00000412640 AKAP7Q9P0M2 348 aaPredicted RBP9.39□□□□□ -0.91
SOX9-AS1-201ENST00000412640 LHX3Q9UBR4 397 aa9.39□□□□□ -0.91
SOX9-AS1-201ENST00000412640 VPS28Q9UK41 221 aa9.39□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PCSK5Q92824 1860 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 UNC13CQ8NB66 2214 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 KPNA3O00505 521 aaPredicted RBP9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 LDB2O43679 373 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 FZD6O60353 706 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SNAP91O60641 907 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PRLP01236 227 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ALDOAP04075 364 aaKnown RBP9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 AP1S1P61966 158 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CNGA3Q16281 694 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PDK4Q16654 411 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 UGP2Q16851 508 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 INSCQ1MX18 579 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 Q6ZVU0 165 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 STRA8Q7Z7C7 330 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SLC25A41Q8N5S1 370 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 TCP10LQ8TDR4 215 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ZNF473Q8WTR7 871 aaKnown RBP9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SCG3Q8WXD2 468 aaKnown RBP9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 KIAA1143Q96AT1 154 aaPredicted RBP9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ISG20Q96AZ6 181 aaKnown RBP9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 AGAP2Q99490 1192 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 C19orf43Q9BQ61 176 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 FAM167BQ9BTA0 163 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 TDRD1Q9BXT4 1180 aaKnown RBP9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 VPS11Q9H270 941 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CYP4F12Q9HCS2 524 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 LUZP4Q9P127 313 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PHTF1Q9UMS5 762 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 GPR34Q9UPC5 381 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PLLPQ9Y342 182 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 KCTD3Q9Y597 815 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PCDHGA3Q9Y5H0 932 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ACTL7AQ9Y615 435 aa9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 MRPS18BQ9Y676 258 aaKnown RBP9.38□□□□□ -0.91
SOX9-AS1-201ENST00000412640 TNRC6AQ8NDV7 1962 aaKnown RBP9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 TACC2O95359 2948 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CCDC168Q8NDH2 2452 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 TTC24A2A3L6 582 aaPredicted RBP9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 NDUFAB1O14561 156 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 COPEO14579 308 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 FPGTO14772 594 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SORBS2O94875 1100 aaKnown RBP9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 VAPBO95292 243 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CTSLP07711 333 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 TAC1P20366 129 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 LEPRP48357 1165 aaKnown RBP9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CCT5P48643 541 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SERPINB8P50452 374 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SCNN1BP51168 640 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 RPL26P61254 145 aaKnown RBP9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 BMPR2Q13873 1038 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 LRRC14Q15048 493 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 TESK1Q15569 626 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 DBN1Q16643 649 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ZSCAN26Q16670 478 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 MROH9Q5TGP6 573 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 LVRNQ6Q4G3 990 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ZNF771Q7L3S4 317 aaPredicted RBP9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PIGWQ7Z7B1 504 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SRLQ86TD4 932 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 LCA5Q86VQ0 697 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ZC3HC1Q86WB0 502 aaKnown RBP9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 C2CD4AQ8NCU7 369 aaPredicted RBP9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 OR13J1Q8NGT2 312 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 GPR150Q8NGU9 434 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 GABPB2Q8TAK5 448 aaPredicted RBP9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CALML6Q8TD86 181 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 MGARPQ8TDB4 240 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 DYDC1Q8WWB3 177 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CABS1Q96KC9 395 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SRPK1Q96SB4 655 aaKnown RBP9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 KLF6Q99612 283 aaPredicted RBP9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 GPR22Q99680 433 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SLC29A3Q9BZD2 475 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 RHOJQ9H4E5 214 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 IARS2Q9NSE4 1012 aaKnown RBP9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 TXNDC16Q9P2K2 825 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SLC17A6Q9P2U8 582 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SLC2A6Q9UGQ3 507 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 PILRAQ9UKJ1 303 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 RPL26L1Q9UNX3 145 aaKnown RBP9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 HS3ST2Q9Y278 367 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 CROCCQ5TZA2 2017 aa9.37□□□□□ -0.91
SOX9-AS1-201ENST00000412640 ANKHD1Q8IWZ3 2542 aaKnown RBP9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 GOLGA8RI6L899 631 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 KLF11O14901 512 aa9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 HTRA2O43464 458 aaPredicted RBP9.36□□□□□ -0.91
SOX9-AS1-201ENST00000412640 SOCS5O75159 536 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms