RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 AOC1P19801 751 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 CCR3P51677 355 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 CDH13P55290 713 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 PKNOX1P55347 436 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 AP1S2P56377 157 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 HSPA14Q0VDF9 509 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 BOP1Q14137 746 aaKnown RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 TBC1D25Q3MII6 688 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 PRPF38BQ5VTL8 546 aaKnown RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 RNF165Q6ZSG1 346 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 UBE2R2Q712K3 238 aaPredicted RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 Q7L0L9 218 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 TRIM69Q86WT6 500 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 HEATR4Q86WZ0 1026 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 HORMAD1Q86X24 394 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 CLYBLQ8N0X4 340 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 SYNPOQ8N3V7 929 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 FBXO15Q8NCQ5 510 aaPredicted RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 AGR3Q8TD06 166 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 SIPA1Q96FS4 1042 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 LENG8Q96PV6 779 aaPredicted RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 OR52B2Q96RD2 323 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 NUSAP1Q9BXS6 441 aaKnown RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 SHCBP1LQ9BZQ2 653 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 OR2AG1Q9H205 316 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 MID1IP1Q9NPA3 183 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 TCF7L2Q9NQB0 619 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 TXLNGQ9NUQ3 528 aa5.4□□□□□ -1.54
EPHA4-202ENST00000409854 EIF2B4Q9UI10 523 aaKnown RBP5.4□□□□□ -1.54
EPHA4-202ENST00000409854 NUMA1Q14980 2115 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 A0A1B0GTL3 188 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 A0A1W2PQU0 124 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 PPP6CO00743 305 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 AZIN1O14977 448 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 DIAPH2O60879 1101 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 ESRRBO95718 433 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 PCCBP05166 539 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 IL9P15248 144 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 GABRG2P18507 467 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 SLC6A12P48065 614 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 HNMTP50135 292 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 PRKCQQ04759 706 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 GTF2H3Q13889 308 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 SKIV2LQ15477 1246 aaKnown RBP5.4□□□□□ -1.55
EPHA4-202ENST00000409854 LSM12Q3MHD2 195 aaKnown RBP5.4□□□□□ -1.55
EPHA4-202ENST00000409854 CHSY3Q70JA7 882 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 GOLGA7Q7Z5G4 137 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 SYVN1Q86TM6 617 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 PACS2Q86VP3 889 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 TREML1Q86YW5 311 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 CPSF7Q8N684 471 aaKnown RBP5.4□□□□□ -1.55
EPHA4-202ENST00000409854 OR56A4Q8NGH8 313 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 OR2L2Q8NH16 312 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 HM13Q8TCT9 377 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 TRPC4APQ8TEL6 797 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 RILPQ96NA2 401 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 TUBB6Q9BUF5 446 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 SLC17A9Q9BYT1 436 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 NUF2Q9BZD4 464 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 CD244Q9BZW8 370 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 MBNL1Q9NR56 388 aaKnown RBP5.4□□□□□ -1.55
EPHA4-202ENST00000409854 ARL8BQ9NVJ2 186 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 USP36Q9P275 1121 aaKnown RBP5.4□□□□□ -1.55
EPHA4-202ENST00000409854 DNAJC15Q9Y5T4 150 aa5.4□□□□□ -1.55
EPHA4-202ENST00000409854 DNMT3AQ9Y6K1 912 aaPredicted RBP5.4□□□□□ -1.55
EPHA4-202ENST00000409854 OR7A17O14581 309 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 SLC22A2O15244 555 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 ANXA5P08758 320 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 HOXC4P09017 264 aaPredicted RBP5.39□□□□□ -1.55
EPHA4-202ENST00000409854 MYCLP1P12525 358 aaPredicted RBP5.39□□□□□ -1.55
EPHA4-202ENST00000409854 TSPAN8P19075 237 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 CYP2A7P20853 494 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 IGFALSP35858 605 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 RPIAP49247 311 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 FOXA1P55317 472 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 PLOD1Q02809 727 aaPredicted RBP5.39□□□□□ -1.55
EPHA4-202ENST00000409854 TRAF3Q13114 568 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 GTF2H2Q13888 395 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 ZXDCQ2QGD7 858 aaPredicted RBP5.39□□□□□ -1.55
EPHA4-202ENST00000409854 C18orf21Q32NC0 220 aaPredicted RBP5.39□□□□□ -1.55
EPHA4-202ENST00000409854 SYTL3Q4VX76 610 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 HABP4Q5JVS0 413 aaKnown RBP5.39□□□□□ -1.55
EPHA4-202ENST00000409854 GTF2H2CQ6P1K8 395 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 MAMSTRQ6ZN01 415 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 ACAD11Q709F0 780 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 CCDC80Q76M96 950 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 LRRC70Q7Z2Q7 622 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 LILRA3Q8N6C8 439 aaPredicted RBP5.39□□□□□ -1.55
EPHA4-202ENST00000409854 DENND6BQ8NEG7 585 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 OR14C36Q8NHC7 312 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 TMEM159Q96B96 161 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 SLC7A6OSQ96CW6 309 aaPredicted RBP5.39□□□□□ -1.55
EPHA4-202ENST00000409854 LGR4Q9BXB1 951 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 C1QTNF7Q9BXJ2 289 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 LRMDAQ9H2I8 198 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 DPEP2Q9H4A9 486 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 WDR55Q9H6Y2 383 aaPredicted RBP5.39□□□□□ -1.55
EPHA4-202ENST00000409854 SEMA4BQ9NPR2 832 aaPredicted RBP5.39□□□□□ -1.55
EPHA4-202ENST00000409854 KLC4Q9NSK0 619 aa5.39□□□□□ -1.55
EPHA4-202ENST00000409854 TSR3Q9UJK0 312 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms