RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 LAMB3Q13751 1172 aa14.33□□□□□ -0.12
CBX3-203ENST00000409747 GPR19Q15760 415 aa14.33□□□□□ -0.12
CBX3-203ENST00000409747 UGT8Q16880 541 aa14.33□□□□□ -0.12
CBX3-203ENST00000409747 TCTN3Q6NUS6 607 aa14.33□□□□□ -0.12
CBX3-203ENST00000409747 APLFQ8IW19 511 aaPredicted RBP14.33□□□□□ -0.12
CBX3-203ENST00000409747 SLC35B2Q8TB61 432 aa14.33□□□□□ -0.12
CBX3-203ENST00000409747 CPT1BQ92523 772 aa14.33□□□□□ -0.12
CBX3-203ENST00000409747 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.33□□□□□ -0.124e-10■■■■■ 86.3
CBX3-203ENST00000409747 CDKN2AIPNLQ96HQ2 116 aa14.33□□□□□ -0.12
CBX3-203ENST00000409747 LRFN5Q96NI6 719 aa14.33□□□□□ -0.12
CBX3-203ENST00000409747 TMEM121Q9BTD3 319 aa14.33□□□□□ -0.12
CBX3-203ENST00000409747 TFB2MQ9H5Q4 396 aaKnown RBP14.33□□□□□ -0.12
CBX3-203ENST00000409747 PACSIN2Q9UNF0 486 aaPredicted RBP14.33□□□□□ -0.12
CBX3-203ENST00000409747 F8W8V4 182 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 LIN7AO14910 233 aaPredicted RBP14.32□□□□□ -0.12
CBX3-203ENST00000409747 FTCDO95954 541 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 FURINP09958 794 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 TPH1P17752 444 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 CDKN1CP49918 316 aaPredicted RBP14.32□□□□□ -0.12
CBX3-203ENST00000409747 ITIH4Q14624 930 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 ZNF658BQ4V348 819 aaPredicted RBP14.32□□□□□ -0.12
CBX3-203ENST00000409747 UBE2Q2Q8WVN8 375 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 MR1Q95460 341 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 TLR10Q9BXR5 811 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 FRMD8P1Q9BZ68 369 aaPredicted RBP14.32□□□□□ -0.12
CBX3-203ENST00000409747 IMPACTQ9P2X3 320 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 TP53TG5Q9Y2B4 290 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 MROH6A6NGR9 719 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 SLC9B1P1A6NJY1 282 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 C2orf74A8MZ97 194 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 DDX3YO15523 660 aaKnown RBP14.32□□□□□ -0.12
CBX3-203ENST00000409747 FTH1P02794 183 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 MSNP26038 577 aaKnown RBP14.32□□□□□ -0.12
CBX3-203ENST00000409747 PRDX3P30048 256 aaKnown RBP14.32□□□□□ -0.12
CBX3-203ENST00000409747 STIP1P31948 543 aaKnown RBP14.32□□□□□ -0.12
CBX3-203ENST00000409747 PREPP48147 710 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 GDF10P55107 478 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 BOP1Q14137 746 aaKnown RBP14.32□□□□□ -0.12
CBX3-203ENST00000409747 DBN1Q16643 649 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 SEL1L2Q5TEA6 688 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 IZUMO3Q5VZ72 239 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 PACS1Q6VY07 963 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 HOOK3Q86VS8 718 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 AMIGO1Q86WK6 493 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 CLDN19Q8N6F1 224 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 DNAAF3Q8N9W5 541 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 OR52E1Q8NGJ3 308 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 TFGQ92734 400 aaPredicted RBP14.32□□□□□ -0.12
CBX3-203ENST00000409747 HES6Q96HZ4 224 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 TTC1Q99614 292 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 PITPNM3Q9BZ71 974 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 SMARCAL1Q9NZC9 954 aa14.32□□□□□ -0.12
CBX3-203ENST00000409747 FARSAQ9Y285 508 aaKnown RBP14.32□□□□□ -0.12
CBX3-203ENST00000409747 BTN3A1O00481 513 aa14.31□□□□□ -0.12
CBX3-203ENST00000409747 CYP2A7P20853 494 aa14.31□□□□□ -0.12
CBX3-203ENST00000409747 PSMA3P25788 255 aa14.31□□□□□ -0.12
CBX3-203ENST00000409747 PLOD1Q02809 727 aaPredicted RBP14.31□□□□□ -0.12
CBX3-203ENST00000409747 CDH17Q12864 832 aa14.31□□□□□ -0.12
CBX3-203ENST00000409747 GPS2Q13227 327 aa14.31□□□□□ -0.12
CBX3-203ENST00000409747 SEMA5AQ13591 1074 aa14.31□□□□□ -0.12
CBX3-203ENST00000409747 LYPLAL1Q5VWZ2 237 aa14.31□□□□□ -0.12
CBX3-203ENST00000409747 FAM199XQ6PEV8 388 aaPredicted RBP14.31□□□□□ -0.12
CBX3-203ENST00000409747 ZNF517Q6ZMY9 492 aaPredicted RBP14.31□□□□□ -0.12
CBX3-203ENST00000409747 TMEM135Q86UB9 458 aa14.31□□□□□ -0.12
CBX3-203ENST00000409747 TMEM139Q8IV31 216 aa14.31□□□□□ -0.12
CBX3-203ENST00000409747 RNF10Q8N5U6 811 aaKnown RBP14.31□□□□□ -0.12
CBX3-203ENST00000409747 CLIP3Q96DZ5 547 aa14.31□□□□□ -0.12
CBX3-203ENST00000409747 HGH1Q9BTY7 390 aa14.31□□□□□ -0.12
CBX3-203ENST00000409747 R3HDM2Q9Y2K5 976 aaKnown RBP14.31□□□□□ -0.12
CBX3-203ENST00000409747 GOLGA6L6A8MZA4 724 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 TMEM150CB9EJG8 249 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 KDM1AO60341 852 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 RAB40ALP0C0E4 278 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 PDHA2P29803 388 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 CDC25BP30305 580 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 SHMT2P34897 504 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 FDFT1P37268 417 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 FOXK1P85037 733 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 SYTL3Q4VX76 610 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 FBXO38Q6PIJ6 1188 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 ASB18Q6ZVZ8 466 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 PIANPQ8IYJ0 282 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 TEX19Q8NA77 164 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 PPM1MQ96MI6 270 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 DESI2Q9BSY9 194 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 TSGA10Q9BZW7 698 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 SLC7A5P2Q9GIP4 190 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 PIH1D1Q9NWS0 290 aaKnown RBP14.3□□□□□ -0.12
CBX3-203ENST00000409747 POLG2Q9UHN1 485 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 SERTAD3Q9UJW9 196 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 TLK1Q9UKI8 766 aa14.3□□□□□ -0.12
CBX3-203ENST00000409747 HEATR9A2RTY3 570 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 E7EVH7 732 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 MEN1O00255 615 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 BTN3A3O00478 584 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 HBQ1P09105 142 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 OR56A5P0C7T3 313 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 PRSS56P0CW18 603 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 ST6GAL1P15907 406 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 LMAN1P49257 510 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms