RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 MYOCQ99972 504 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 C1QTNF7Q9BXJ2 289 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 TCF7L2Q9NQB0 619 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 ARL15Q9NXU5 204 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 EBF1Q9UH73 591 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 ZNF225Q9UK10 706 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 RRP15Q9Y3B9 282 aaKnown RBP13.75□□□□□ -0.21
GPNMB-203ENST00000409458 TRPC5OSA6NMA1 111 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 ARHGEF33A8MVX0 844 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 E9PBE3 544 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 LIN7AO14910 233 aaPredicted RBP13.75□□□□□ -0.21
GPNMB-203ENST00000409458 AZIN1O14977 448 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 SLC31A1O15431 190 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 KLHL41O60662 606 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 CCDC22O60826 627 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 PSIP1O75475 530 aaKnown RBP13.75□□□□□ -0.21
GPNMB-203ENST00000409458 CBX6O95503 412 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 MLYCDO95822 493 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 ANXA5P08758 320 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 MYCLP1P12525 358 aaPredicted RBP13.75□□□□□ -0.21
GPNMB-203ENST00000409458 GDF5P43026 501 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 BDKRB1P46663 353 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 SFSWAPQ12872 951 aaKnown RBP13.75□□□□□ -0.21
GPNMB-203ENST00000409458 GTF2H2Q13888 395 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 LRRC32Q14392 662 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 NFE2L1Q14494 772 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 LSM12Q3MHD2 195 aaKnown RBP13.75□□□□□ -0.21
GPNMB-203ENST00000409458 UGT3A2Q3SY77 523 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 FAM91A1Q658Y4 838 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 GTF2H2CQ6P1K8 395 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 FAM83HQ6ZRV2 1179 aaPredicted RBP13.75□□□□□ -0.21
GPNMB-203ENST00000409458 KIRREL3Q8IZU9 778 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 OR52B6Q8NGF0 335 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 OR2L2Q8NH16 312 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 CFAP61Q8NHU2 1237 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 HM13Q8TCT9 377 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 MAELQ96JY0 434 aaKnown RBP13.75□□□□□ -0.21
GPNMB-203ENST00000409458 CD244Q9BZW8 370 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 NOL11Q9H8H0 719 aaKnown RBP13.75□□□□□ -0.21
GPNMB-203ENST00000409458 MEAF6Q9HAF1 191 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 LMAN1LQ9HAT1 526 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 POLMQ9NP87 494 aaPredicted RBP13.75□□□□□ -0.21
GPNMB-203ENST00000409458 LTB4R2Q9NPC1 389 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 PHPT1Q9NRX4 125 aaPredicted RBP13.75□□□□□ -0.21
GPNMB-203ENST00000409458 USP36Q9P275 1121 aaKnown RBP13.75□□□□□ -0.21
GPNMB-203ENST00000409458 SORCS3Q9UPU3 1222 aa13.75□□□□□ -0.21
GPNMB-203ENST00000409458 C17orf113A0A1B0GUU1 675 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 MGAT4DA6NG13 374 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 CHURC1-FNTBB4DL54 471 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 H3BM21 787 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 OR7A17O14581 309 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 CCNT2O60583 730 aaKnown RBP13.74□□□□□ -0.21
GPNMB-203ENST00000409458 FGF4P08620 206 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 T-ENOLP0DO92 83 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 INHBCP55103 352 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 NCALDP61601 193 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 ARHGAP8P85298 464 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 FZD5Q13467 585 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 GAS6Q14393 721 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 UBXN2BQ14CS0 331 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 ZXDCQ2QGD7 858 aaPredicted RBP13.74□□□□□ -0.21
GPNMB-203ENST00000409458 CDKL4Q5MAI5 379 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 ACAD11Q709F0 780 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 SYT13Q7L8C5 426 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 LRRTM4Q86VH4 590 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 TRIM69Q86WT6 500 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 TREML1Q86YW5 311 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 CLYBLQ8N0X4 340 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 TEX9Q8N6V9 391 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 DCBLD1Q8N8Z6 715 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 CDK15Q96Q40 435 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 ZNF382Q96SR6 550 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 CCDC106Q9BWC9 280 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 TRIM54Q9BYV2 358 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 FOXQ1Q9C009 403 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 BTBD1Q9H0C5 482 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 ACTR5Q9H9F9 607 aaPredicted RBP13.74□□□□□ -0.21
GPNMB-203ENST00000409458 ITM2CQ9NQX7 267 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 SAR1AQ9NR31 198 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 TM7SF3Q9NS93 570 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 ARL8BQ9NVJ2 186 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 DNAJC15Q9Y5T4 150 aa13.74□□□□□ -0.21
GPNMB-203ENST00000409458 PABPN1LA6NDY0 278 aaKnown RBP13.73□□□□□ -0.21
GPNMB-203ENST00000409458 CAPN14A8MX76 684 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 UNC5CO95185 931 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 ESRRBO95718 433 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 HIST1H2AGP0C0S8 130 aaPredicted RBP13.73□□□□□ -0.21
GPNMB-203ENST00000409458 HIST1H2ADP20671 130 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 DGKEP52429 567 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 ERVPABLB-1P60509 514 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 CCSMST1Q4G0I0 132 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 ANO7Q6IWH7 933 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 LETMD1Q6P1Q0 360 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 GPRIN3Q6ZVF9 776 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 PGBD3Q8N328 593 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 TCAIMQ8N3R3 496 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 SYNPOQ8N3V7 929 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 OXR1Q8N573 874 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 OR2T34Q8NGX1 318 aa13.73□□□□□ -0.21
GPNMB-203ENST00000409458 TWIST2Q8WVJ9 160 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms