RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 STON1Q9Y6Q2 735 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 DENND4AQ7Z401 1863 aa18.57■□□□□ 0.56
USP39-202ENST00000409025 ANTXRLA6NF34 631 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 CFLARO15519 480 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 P2RY2P41231 377 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 MTHFRP42898 656 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 GPR1P46091 355 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 REP15Q6BDI9 236 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 RAET1GQ6H3X3 334 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 EP400NLQ6ZTU2 488 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 EFCAB3Q8N7B9 438 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 SNX31Q8N9S9 440 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 OR2T11Q8NH01 316 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 TMEM159Q96B96 161 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 ERLEC1Q96DZ1 483 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 CDRT15Q96T59 188 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 RPP25Q9BUL9 199 aaKnown RBP18.56■□□□□ 0.56
USP39-202ENST00000409025 NTMT1Q9BV86 223 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 EPHX3Q9H6B9 360 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 SDR39U1Q9NRG7 319 aaPredicted RBP18.56■□□□□ 0.56
USP39-202ENST00000409025 CNOT6Q9ULM6 557 aaKnown RBP18.56■□□□□ 0.56
USP39-202ENST00000409025 MYO9BQ13459 2157 aa18.56■□□□□ 0.56
USP39-202ENST00000409025 NRP2O60462 931 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 MATN4O95460 622 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 SOD1P00441 154 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 EBLN1P0CF75 366 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 AP1S2P56377 157 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 ERVK-8P63133 956 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 DPTQ07507 201 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 DLX2Q07687 328 aaPredicted RBP18.55■□□□□ 0.56
USP39-202ENST00000409025 CNTN1Q12860 1018 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 ATP6AP1LQ52LC2 224 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 LRRC70Q7Z2Q7 622 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 FUNDC1Q8IVP5 155 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 GLMNQ92990 594 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 CCDC124Q96CT7 223 aaKnown RBP18.55■□□□□ 0.56
USP39-202ENST00000409025 FAM8A1Q9UBU6 413 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 TRPS1Q9UHF7 1281 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 POMPQ9Y244 141 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 CCDC85CA6NKD9 419 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 BBIP1A8MTZ0 92 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 FBP2O00757 339 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 TBX10O75333 385 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 SORBS2O94875 1100 aaKnown RBP18.55■□□□□ 0.56
USP39-202ENST00000409025 ANP32DO95626 131 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 MRPL19P49406 292 aaKnown RBP18.55■□□□□ 0.56
USP39-202ENST00000409025 NME5P56597 212 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 GRIK2Q13002 908 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 MTSS1LQ765P7 747 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 NLRP8Q86W28 1048 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 MYLK4Q86YV6 388 aaPredicted RBP18.55■□□□□ 0.56
USP39-202ENST00000409025 CHPFQ8IZ52 775 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 AIG1Q9NVV5 245 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 FADS3Q9Y5Q0 445 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 GPR45Q9Y5Y3 372 aa18.55■□□□□ 0.56
USP39-202ENST00000409025 TMEM202A6NGA9 273 aa18.54■□□□□ 0.56
USP39-202ENST00000409025 ARNTLO00327 626 aa18.54■□□□□ 0.56
USP39-202ENST00000409025 MRASO14807 208 aa18.54■□□□□ 0.56
USP39-202ENST00000409025 GSTM1P09488 218 aa18.54■□□□□ 0.56
USP39-202ENST00000409025 GNAZP19086 355 aa18.54■□□□□ 0.56
USP39-202ENST00000409025 WASP42768 502 aa18.54■□□□□ 0.56
USP39-202ENST00000409025 HTR6P50406 440 aa18.54■□□□□ 0.56
USP39-202ENST00000409025 GSTM4Q03013 218 aa18.54■□□□□ 0.56
USP39-202ENST00000409025 LRP8Q14114 963 aa18.54■□□□□ 0.56
USP39-202ENST00000409025 C6orf136Q5SQH8 315 aa18.54■□□□□ 0.56
USP39-202ENST00000409025 Q6ZSR9 355 aa18.54■□□□□ 0.56
USP39-202ENST00000409025 P2RY13Q9BPV8 354 aa18.54■□□□□ 0.56
USP39-202ENST00000409025 CLDND1Q9NY35 253 aa18.54■□□□□ 0.56
USP39-202ENST00000409025 STX18Q9P2W9 335 aaKnown RBP18.54■□□□□ 0.56
USP39-202ENST00000409025 STOML1Q9UBI4 398 aa18.54■□□□□ 0.56
USP39-202ENST00000409025 SLC5A10A0PJK1 596 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 LOC730098B7Z3J9 87 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 K7ESM1 405 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 NR5A2O00482 541 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 NPC1O15118 1278 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 SYNCRIPO60506 623 aaKnown RBP18.53■□□□□ 0.56
USP39-202ENST00000409025 RNASEH1O60930 286 aaKnown RBP18.53■□□□□ 0.56
USP39-202ENST00000409025 FKBP6O75344 327 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 WDR47O94967 919 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 MAP4P27816 1152 aaKnown RBP18.53■□□□□ 0.56
USP39-202ENST00000409025 SOX9P48436 509 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 GALK1P51570 392 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 DIO3P55073 304 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 PSME3P61289 254 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 ABRQ12979 859 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 ENPP2Q13822 863 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 BCL7AQ4VC05 210 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 PIGGQ5H8A4 983 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 PIP5KL1Q5T9C9 394 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 RASGRP3Q8IV61 690 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 ZNF513Q8N8E2 541 aaPredicted RBP18.53■□□□□ 0.56
USP39-202ENST00000409025 FNDC5Q8NAU1 212 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 JADE3Q92613 823 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 EBF2Q9HAK2 575 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 CLDN9O95484 217 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 TNFRSF4P43489 277 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 MAPK9P45984 424 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 SLC6A12P48065 614 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 AP2B1P63010 937 aa18.53■□□□□ 0.56
USP39-202ENST00000409025 SLC34A1Q06495 639 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms