RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 DHDDSQ86SQ9 333 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 RETREG3Q86VR2 466 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 CPA6Q8N4T0 437 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 ARRDC3Q96B67 414 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 PBX4Q9BYU1 374 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 SLC32A1Q9H598 525 aa24.16■■□□□ 1.46
DNMT3A-206ENST00000406659 TBC1D3BA6NDS4 549 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 OR2AG2A6NM03 316 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 C9JVG2 144 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 SLC22A3O75751 556 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 EBLN1P0CF75 366 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 ATP6V1C1P21283 382 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 METAP1P53582 386 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 ELP6Q0PNE2 266 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 ABRAXAS2Q15018 415 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 C8orf82Q6P1X6 216 aaPredicted RBP24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 HOMEZQ8IX15 550 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 BEND7Q8N7W2 519 aaPredicted RBP24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 TERB1Q8NA31 727 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 BHLHE22Q8NFJ8 381 aaPredicted RBP24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 MCOLN3Q8TDD5 553 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 UCMAQ8WVF2 138 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 SPDL1Q96EA4 605 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 COQ10AQ96MF6 247 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 GID8Q9NWU2 228 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 SUCOQ9UBS9 1254 aaKnown RBP24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 TRPS1Q9UHF7 1281 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 MSRAQ9UJ68 235 aa24.15■■□□□ 1.46
DNMT3A-206ENST00000406659 LOC730098B7Z3J9 87 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 H0Y858 1186 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 GFYI3L273 518 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 GGT5P36269 586 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 EMX2Q04743 252 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 ELAVL3Q14576 367 aaKnown RBP24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 CMPK2Q5EBM0 449 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 SAMD4BQ5PRF9 694 aaKnown RBP24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 PRMT9Q6P2P2 845 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 VITQ6UXI7 678 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 SFTPA1Q8IWL2 248 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 PPP2R3CQ969Q6 453 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 DTD2Q96FN9 168 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 PPP1R16AQ96I34 528 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 HOPXQ9BPY8 73 aaPredicted RBP24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 ZIM2Q9NZV7 527 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 TMEM181Q9P2C4 612 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 MAP10Q9P2G4 905 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 RNF11Q9Y3C5 154 aa24.14■■□□□ 1.46
DNMT3A-206ENST00000406659 ACOT8O14734 319 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 FFAR3O14843 346 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 GPR42O15529 346 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 WDR47O94967 919 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 ACADSP16219 412 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 HNMTP50135 292 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 UFM1P61960 85 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 MAP7D1Q3KQU3 841 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 COQ5Q5HYK3 327 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 YAF2Q8IY57 180 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 RASGEF1AQ8N9B8 481 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 FAM156AQ8NDB6 213 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 ASB9Q96DX5 294 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 PPP3R2Q96LZ3 170 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 FAM129BQ96TA1 746 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 HBEGFQ99075 208 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 IL1RL2Q9HB29 575 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 DYRK4Q9NR20 520 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 HEBP1Q9NRV9 189 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 TMEM45AQ9NWC5 275 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 EPS15L1Q9UBC2 864 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 KLQ9UEF7 1012 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 CDH7Q9ULB5 785 aa24.14■■□□□ 1.45
DNMT3A-206ENST00000406659 H3BNX3 289 aa24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 SLC28A1O00337 649 aa24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 LSM1O15116 133 aaKnown RBP24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 INPP4BO15327 924 aa24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 RGS14O43566 566 aa24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 ATG13O75143 517 aa24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 TMEM115Q12893 351 aaPredicted RBP24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 RUNX3Q13761 415 aa24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 TRIM25Q14258 630 aaKnown RBP24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 AP5B1Q2VPB7 878 aa24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 SYTL3Q4VX76 610 aa24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 ZFP1Q6P2D0 407 aa24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 LRRC70Q7Z2Q7 622 aa24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 SUSD6Q92537 303 aa24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 TMEM245Q9H330 911 aa24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 FAM8A1Q9UBU6 413 aa24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 COQ6Q9Y2Z9 468 aa24.13■■□□□ 1.45
DNMT3A-206ENST00000406659 A0A1W2PP18 115 aa24.12■■□□□ 1.45
DNMT3A-206ENST00000406659 EPOPA6NHQ4 379 aa24.12■■□□□ 1.45
DNMT3A-206ENST00000406659 SPINT1O43278 529 aa24.12■■□□□ 1.45
DNMT3A-206ENST00000406659 ULK1O75385 1050 aa24.12■■□□□ 1.45
DNMT3A-206ENST00000406659 SLCO2B1O94956 709 aa24.12■■□□□ 1.45
DNMT3A-206ENST00000406659 POLR2JP52435 117 aaKnown RBP24.12■■□□□ 1.45
DNMT3A-206ENST00000406659 SLC7A2P52569 658 aa24.12■■□□□ 1.45
DNMT3A-206ENST00000406659 ATXN3P54252 364 aaPredicted RBP24.12■■□□□ 1.45
DNMT3A-206ENST00000406659 AP1S2P56377 157 aa24.12■■□□□ 1.45
DNMT3A-206ENST00000406659 NAIF1Q69YI7 327 aaPredicted RBP24.12■■□□□ 1.45
DNMT3A-206ENST00000406659 CYP2U1Q7Z449 544 aa24.12■■□□□ 1.45
DNMT3A-206ENST00000406659 TEX37Q96LM6 180 aa24.12■■□□□ 1.45
DNMT3A-206ENST00000406659 CCM2Q9BSQ5 444 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms