RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 CRATP43155 626 aa13.74□□□□□ -0.21
HMGA2-204ENST00000403681 MAGEA12P43365 314 aa13.74□□□□□ -0.21
HMGA2-204ENST00000403681 GRSF1Q12849 480 aaKnown RBP eCLIP13.74□□□□□ -0.21
HMGA2-204ENST00000403681 VGLL4Q14135 290 aa13.74□□□□□ -0.21
HMGA2-204ENST00000403681 ZNF181Q2M3W8 571 aa13.74□□□□□ -0.21
HMGA2-204ENST00000403681 KIAA1191Q96A73 305 aa13.74□□□□□ -0.21
HMGA2-204ENST00000403681 OSBPL2Q9H1P3 480 aa13.74□□□□□ -0.21
HMGA2-204ENST00000403681 SSR3Q9UNL2 185 aa13.74□□□□□ -0.21
HMGA2-204ENST00000403681 PCDHGA11Q9Y5H2 935 aa13.74□□□□□ -0.21
HMGA2-204ENST00000403681 IGKV6D-21A0A0A0MT36 114 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 ANXA5P08758 320 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 PAX3P23760 479 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 HNRNPFP52597 415 aaKnown RBP13.73□□□□□ -0.21
HMGA2-204ENST00000403681 CDKN2DP55273 166 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 HMGCS1Q01581 520 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 ZNF517Q6ZMY9 492 aaPredicted RBP13.73□□□□□ -0.21
HMGA2-204ENST00000403681 SLC34A3Q8N130 599 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 BRSK1Q8TDC3 778 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 BHMTQ93088 406 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 ZNF486Q96H40 463 aaPredicted RBP13.73□□□□□ -0.21
HMGA2-204ENST00000403681 MAELQ96JY0 434 aaKnown RBP13.73□□□□□ -0.21
HMGA2-204ENST00000403681 NFKBIZQ9BYH8 718 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 TP63Q9H3D4 680 aaPredicted RBP13.73□□□□□ -0.21
HMGA2-204ENST00000403681 MKLN1Q9UL63 735 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 FAM220BPB1ANY3 271 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 CD1DP15813 335 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 KIR3DL1P43629 444 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 AGTR2P50052 363 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 RHOAP61586 193 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 ZNF45Q02386 682 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 EMX2Q04743 252 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 ZNF33AQ06730 810 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 TP53BP2Q13625 1128 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 DOK6Q6PKX4 331 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 PTCHD4Q6ZW05 846 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 OSTM1Q86WC4 334 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 HS3ST5Q8IZT8 346 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 ATL1Q8WXF7 558 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 KLRG1Q96E93 195 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 ZNF641Q96N77 438 aaPredicted RBP13.73□□□□□ -0.21
HMGA2-204ENST00000403681 KATNAL1Q9BW62 490 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 C1QTNF1Q9BXJ1 281 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 FAM155AB1AL88 458 aaPredicted RBP13.73□□□□□ -0.21
HMGA2-204ENST00000403681 FAM47E-STBD1D6RA91 191 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 PPP6CO00743 305 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 NUAK1O60285 661 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 PRKCGP05129 697 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 MZF1P28698 734 aaPredicted RBP13.73□□□□□ -0.21
HMGA2-204ENST00000403681 HTR7P34969 479 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 CCT3P49368 545 aaKnown RBP13.73□□□□□ -0.21
HMGA2-204ENST00000403681 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.73□□□□□ -0.21
HMGA2-204ENST00000403681 RASAL3Q86YV0 1011 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 MMAAQ8IVH4 418 aaKnown RBP13.73□□□□□ -0.21
HMGA2-204ENST00000403681 CADM3Q8N126 398 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 DTWD1Q8N5C7 304 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 OR52J3Q8NH60 311 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 NEURL2Q9BR09 285 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 TMEM246Q9BRR3 403 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 PRRG3Q9BZD7 231 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 CFL2Q9Y281 166 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 IFT52Q9Y366 437 aa13.73□□□□□ -0.21
HMGA2-204ENST00000403681 BEST1O76090 585 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 PSMA1P25786 263 aaKnown RBP13.72□□□□□ -0.21
HMGA2-204ENST00000403681 NUDT6P53370 316 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 FOXA1P55317 472 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 GRIK2Q13002 908 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 PTPRCAPQ14761 206 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 NFE2Q16621 373 aaPredicted RBP13.72□□□□□ -0.21
HMGA2-204ENST00000403681 SIRPB2Q5JXA9 342 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 PELI3Q8N2H9 469 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 FRS2Q8WU20 508 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 DIRAS2Q96HU8 199 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 APOLD1Q96LR9 279 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 YME1L1Q96TA2 773 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 AARSD1Q9BTE6 412 aaKnown RBP13.72□□□□□ -0.21
HMGA2-204ENST00000403681 NUDT4Q9NZJ9 180 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 MAP10Q9P2G4 905 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 LRFN2Q9ULH4 789 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 PRELID1Q9Y255 219 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 PAPPAQ13219 1627 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 YES1P07947 543 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 DNAJA1P31689 397 aaKnown RBP13.72□□□□□ -0.21
HMGA2-204ENST00000403681 SLC39A12Q504Y0 691 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 SDHAF4Q5VUM1 108 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 ENPP6Q6UWR7 440 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 PHACTR4Q8IZ21 702 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 SLC38A4Q969I6 547 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 PYURFQ96I23 114 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 CNDP2Q96KP4 475 aaKnown RBP13.72□□□□□ -0.21
HMGA2-204ENST00000403681 PHOX2BQ99453 314 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 CNPPD1Q9BV87 410 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 OR2B2Q9GZK3 357 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 CLEC4MQ9H2X3 399 aaPredicted RBP13.72□□□□□ -0.21
HMGA2-204ENST00000403681 CCDC177Q9NQR7 707 aaPredicted RBP13.72□□□□□ -0.21
HMGA2-204ENST00000403681 COL4A1P02462 1669 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 FAM240BA0A1B0GVZ2 78 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 A0A1W2PQ72 361 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 FAM172BPA6NC97 362 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 HNRNPCL2B2RXH8 293 aa13.72□□□□□ -0.21
HMGA2-204ENST00000403681 ARVCFO00192 962 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms