RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 ZNF285Q96NJ3 590 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 SLC9A7Q96T83 725 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 MSTO1Q9BUK6 570 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ZYG11BQ9C0D3 744 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 NARFLQ9H6Q4 476 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 SNX15Q9NRS6 342 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 SETD4Q9NVD3 440 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 MPP6Q9NZW5 540 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ZNF229Q9UJW7 825 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 MAGED2Q9UNF1 606 aaPredicted RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 hCG_1818297A0A087WSY0 165 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 TMEM191CA6NGB0 347 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 SLC15A5A6NIM6 579 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 A8MXQ7 604 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 SCAMP2O15127 329 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 IPO13O94829 963 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 NTRK1P04629 796 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 TMEM191BP0C7N4 346 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 TNFSF4P23510 183 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ID4P47928 161 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 SCAND1P57086 179 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 RPS6P62753 249 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 MRPS9P82933 396 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 PMP22Q01453 160 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 SLC3A1Q07837 685 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 POU6F1Q14863 301 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 PGM5Q15124 567 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 FLYWCH1Q4VC44 716 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ATG16L1Q676U5 607 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ARHGAP17Q68EM7 881 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 RGMBQ6NW40 437 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ADGRD1Q6QNK2 874 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 C15orf39Q6ZRI6 1047 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 DPPA2Q7Z7J5 298 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 PRPF39Q86UA1 669 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 HERC6Q8IVU3 1022 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 SULF2Q8IWU5 870 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 MRPL43Q8N983 215 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 RAET1EQ8TD07 263 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ACTRT2Q8TDY3 377 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 CREB3L4Q8TEY5 395 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 JADE3Q92613 823 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 NTAN1Q96AB6 310 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ELMO3Q96BJ8 720 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ACSF2Q96CM8 615 aaPredicted RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 TAAR9Q96RI9 348 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 TAAR1Q96RJ0 339 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 TMEM121Q9BTD3 319 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 HDHD2Q9H0R4 259 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 TLE6Q9H808 572 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 COQ10BQ9H8M1 238 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 COL20A1Q9P218 1284 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 C5AR2Q9P296 337 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 RUVBL2Q9Y230 463 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 V9GYQ6 96 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 CLUHO75153 1309 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 A0A1W2PPM1 405 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 MEX3AA1L020 520 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 K7ERI5 159 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 APOA1P02647 267 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 MMP8P22894 467 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 SLC1A6P48664 564 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ACOT2P49753 483 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 CDK7P50613 346 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ZNF81P51508 661 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 DYNLT1P63172 113 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 CDK16Q00536 496 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 SLC34A1Q06495 639 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 TRAF2Q12933 501 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 TFDP1Q14186 410 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 HFEQ30201 348 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 PDSS1Q5T2R2 415 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 TDRD10Q5VZ19 366 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 KCTD11Q693B1 232 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 SLC39A4Q6P5W5 647 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ARSKQ6UWY0 536 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 PRR23BQ6ZRT6 265 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 SLC16A12Q6ZSM3 486 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ERN2Q76MJ5 926 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 POLNQ7Z5Q5 900 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 PTRH1Q86Y79 214 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ANKLE1Q8NAG6 615 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 PIWIL2Q8TC59 973 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 PNPT1Q8TCS8 783 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ADAMTS15Q8TE58 950 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 CHTF18Q8WVB6 975 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ROBO4Q8WZ75 1007 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 KHSRPQ92945 711 aaKnown RBP eCLIP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 YIPF5Q969M3 257 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 LURAP1Q96LR2 239 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 CGRRF1Q99675 332 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 PDCD2LQ9BRP1 358 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 PIGUQ9H490 435 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 RAVER2Q9HCJ3 691 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 ZNF70Q9UC06 446 aaPredicted RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 SLC9A8Q9Y2E8 581 aa6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 TNPO3Q9Y5L0 923 aaKnown RBP6.49□□□□□ -1.37
TM9SF4-202ENST00000398022 COPEO14579 308 aa6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 MITFO75030 526 aaPredicted RBP6.48□□□□□ -1.37
TM9SF4-202ENST00000398022 RAD17O75943 681 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms