RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 HEPACAMQ14CZ8 416 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 RFTN2Q52LD8 501 aaPredicted RBP11.18□□□□□ -0.62
TTC28-201ENST00000397906 ARMC3Q5W041 872 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 ZNF776Q68DI1 518 aaPredicted RBP11.18□□□□□ -0.62
TTC28-201ENST00000397906 SULT1C3Q6IMI6 304 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 KRT74Q7RTS7 529 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 SNX33Q8WV41 574 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 TMEM175Q9BSA9 504 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 TBL1XR1Q9BZK7 514 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 FZD8Q9H461 694 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 ZNF222Q9UK12 451 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 PLLPQ9Y342 182 aa11.18□□□□□ -0.62
TTC28-201ENST00000397906 J3KR12 359 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 HKDC1Q2TB90 917 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 SATL1Q86VE3 508 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 NKX2-4Q9H2Z4 354 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 DNAJB4Q9UDY4 337 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 HLA-DQB2P05538 268 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 GKP32189 559 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 CCR3P51677 355 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 IRF9Q00978 393 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 TOR1AIP1Q5JTV8 583 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 COMMD9Q9P000 198 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 ANKRD26Q9UPS8 1709 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 MAGEB17A8MXT2 336 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 ARHGAP40Q5TG30 622 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 PACS2Q86VP3 889 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 DGAT2Q96PD7 388 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 GAL3ST1Q99999 423 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 DNASE1L1P49184 302 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 OR5T3Q8NGG3 340 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 PRR5-ARHGAP8B1AHC4 643 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 TSHRP16473 764 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 ARHGAP8P85298 464 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 FAR1Q8WVX9 515 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 SLC17A6Q9P2U8 582 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 TESMINQ9Y4I5 508 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 SLIT2O94813 1529 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 ZYG11AQ6WRX3 759 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 FNIP1Q8TF40 1166 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 AK5Q9Y6K8 562 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 MYCLP1P12525 358 aaPredicted RBP11.17□□□□□ -0.62
TTC28-201ENST00000397906 RFC2P35250 354 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 JAM2P57087 298 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 LRRTM4Q86VH4 590 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 UBE2J2Q8N2K1 259 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 FATE1Q969F0 183 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 FAM192AQ9GZU8 254 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 NDUFA13Q9P0J0 144 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 SSR3Q9UNL2 185 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 NCK1P16333 377 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 LCP2Q13094 533 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 HNRNPDQ14103 355 aaKnown RBP11.17□□□□□ -0.62
TTC28-201ENST00000397906 DCST1Q5T197 706 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 OR5AK3PQ8NH89 298 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 ADAM7Q9H2U9 754 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 DIABLOQ9NR28 239 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 NOX1Q9Y5S8 564 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 RGPD8O14715 1765 aaPredicted RBP11.17□□□□□ -0.62
TTC28-201ENST00000397906 PIP5K1BO14986 540 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 KRT36O76013 467 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 BPGMP07738 259 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 SIRPB2Q5JXA9 342 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 SEZ6LQ9BYH1 1024 aa11.17□□□□□ -0.62
TTC28-201ENST00000397906 A0A087WXM4 84 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 A0A0U1RQF3 1178 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 CASKO14936 926 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 ENTPD5O75356 428 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 RSL1D1O76021 490 aaKnown RBP11.16□□□□□ -0.62
TTC28-201ENST00000397906 ANPEPP15144 967 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 GNAZP19086 355 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 RPP38P78345 283 aaKnown RBP11.16□□□□□ -0.62
TTC28-201ENST00000397906 SLC29A4Q7RTT9 530 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 OR2AJ1Q8NGZ0 328 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 SLC35G5Q96KT7 338 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 MAGEL2Q9UJ55 1249 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 IRAK2O43187 625 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 KLK3P07288 261 aaPredicted RBP11.16□□□□□ -0.62
TTC28-201ENST00000397906 KLF1Q13351 362 aaPredicted RBP11.16□□□□□ -0.62
TTC28-201ENST00000397906 REP15Q6BDI9 236 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 NUP54Q7Z3B4 507 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 SLC44A1Q8WWI5 657 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 C12orf42Q96LP6 360 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 RAB11FIP5Q9BXF6 653 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.16□□□□□ -0.62
TTC28-201ENST00000397906 SDCBP2Q9H190 292 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 RAB21Q9UL25 225 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 PEX12O00623 359 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 ZNF208O43345 1280 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 B4GALT2O60909 372 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 SIM2Q14190 667 aaPredicted RBP11.16□□□□□ -0.62
TTC28-201ENST00000397906 DHRS1Q96LJ7 313 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 CEP295NLQ96MC4 621 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 NIPSNAP2O75323 286 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 CCNFP41002 786 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 IL12RB1P42701 662 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 ARRB1P49407 418 aaPredicted RBP11.16□□□□□ -0.62
TTC28-201ENST00000397906 CHRNA6Q15825 494 aa11.16□□□□□ -0.62
TTC28-201ENST00000397906 ARSJQ5FYB0 599 aaPredicted RBP11.16□□□□□ -0.62
TTC28-201ENST00000397906 GLYATQ6IB77 296 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms