RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CDC7O00311 574 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 KCNJ13O60928 360 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 CAPN1P07384 714 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 POU2F2P09086 479 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 RPL10P27635 214 aaKnown RBP8.12□□□□□ -1.11
PTPRD-204ENST00000397606 NCALDP61601 193 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 SUZ12Q15022 739 aaKnown RBP8.12□□□□□ -1.11
PTPRD-204ENST00000397606 MAPKAPK3Q16644 382 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 HLA-DQA1Q5Y7H0 255 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 IRGCQ6NXR0 463 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 BHLHB9Q6PI77 547 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 Q6ZNB5 142 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 ZNF621Q6ZSS3 439 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 SLC9B2Q86UD5 537 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 POU5F2Q8N7G0 328 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 MYLK2Q9H1R3 596 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 IL26Q9NPH9 171 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 MARCH4Q9P2E8 410 aaPredicted RBP8.12□□□□□ -1.11
PTPRD-204ENST00000397606 KLHL3Q9UH77 587 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 TIMM22Q9Y584 194 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 A8MT66 165 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 WASH3PC4AMC7 463 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 OR4F21O95013 312 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 F7P08709 466 aaPredicted RBP8.12□□□□□ -1.11
PTPRD-204ENST00000397606 HPGDP15428 266 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 TIMP2P16035 220 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 PSMA4P25789 261 aaKnown RBP8.12□□□□□ -1.11
PTPRD-204ENST00000397606 ASMTP46597 345 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 EPHA5P54756 1037 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 TBL3Q12788 808 aaKnown RBP8.12□□□□□ -1.11
PTPRD-204ENST00000397606 TJAP1Q5JTD0 557 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 IRAK1BP1Q5VVH5 260 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 GPR180Q86V85 440 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 C11orf74Q86VG3 221 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 CENPLQ8N0S6 344 aaPredicted RBP8.12□□□□□ -1.11
PTPRD-204ENST00000397606 TTLQ8NG68 377 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 LMX1AQ8TE12 382 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 ESAMQ96AP7 390 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 RMI1Q9H9A7 625 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 KCNK12Q9HB15 430 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 PREBQ9HCU5 417 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 MRPS30Q9NP92 439 aaKnown RBP8.12□□□□□ -1.11
PTPRD-204ENST00000397606 MTF2Q9Y483 593 aaPredicted RBP8.12□□□□□ -1.11
PTPRD-204ENST00000397606 OR1F1O43749 312 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 EPN2O95208 641 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 RABIFP47224 123 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 CYP4F2P78329 520 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 PRAMEF14Q5SWL7 426 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 PRAMEF13Q5VWM6 474 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 CYP4V2Q6ZWL3 525 aaPredicted RBP8.12□□□□□ -1.11
PTPRD-204ENST00000397606 PLPP6Q8IY26 295 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 C1orf50Q9BV19 199 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 ITM2BQ9Y287 266 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 DTNAQ9Y4J8 743 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 NFS1Q9Y697 457 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 SCN1AP35498 2009 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 DYTNA2CJ06 578 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 PLK4O00444 970 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 TRIM24O15164 1050 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 SLC16A5O15375 505 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 LDB2O43679 373 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 KCNH1O95259 989 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 MPC1LP0DKB6 136 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 SCTRP47872 440 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 RFX3P48380 749 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 STXBP1P61764 594 aaKnown RBP8.11□□□□□ -1.11
PTPRD-204ENST00000397606 KCNC3Q14003 757 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 TRIM40Q6P9F5 258 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 LIPIQ6XZB0 460 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 DNAJC14Q6Y2X3 702 aaPredicted RBP8.11□□□□□ -1.11
PTPRD-204ENST00000397606 DCBLD1Q8N8Z6 715 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 GPR150Q8NGU9 434 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 RP9Q8TA86 221 aaKnown RBP8.11□□□□□ -1.11
PTPRD-204ENST00000397606 MAGED4Q96JG8 741 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 APOLD1Q96LR9 279 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 FAF1Q9UNN5 650 aaPredicted RBP8.11□□□□□ -1.11
PTPRD-204ENST00000397606 PRKAB1Q9Y478 270 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 AXIN1O15169 862 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 SLC22A3O75751 556 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 CDH2P19022 906 aaPredicted RBP8.11□□□□□ -1.11
PTPRD-204ENST00000397606 PREPP48147 710 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 CCR8P51685 355 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 GRIN2CQ14957 1233 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 SAMD4BQ5PRF9 694 aaKnown RBP8.11□□□□□ -1.11
PTPRD-204ENST00000397606 RIPOR1Q6ZS17 1223 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 TRIB3Q96RU7 358 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 KCTD14Q9BQ13 255 aaPredicted RBP8.11□□□□□ -1.11
PTPRD-204ENST00000397606 GTPBP2Q9BX10 602 aaKnown RBP8.11□□□□□ -1.11
PTPRD-204ENST00000397606 SYNDIG1LA6NDD5 238 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 EIF3FO00303 357 aaPredicted RBP8.11□□□□□ -1.11
PTPRD-204ENST00000397606 DLX3O60479 287 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 GLULP15104 373 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 CHRNB3Q05901 458 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 TGFBIQ15582 683 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 ANXA8L1Q5VT79 327 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 OR9A1PQ8NGU1 263 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 RHEBL1Q8TAI7 183 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 WFDC5Q8TCV5 224 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 LMLNQ96KR4 655 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 LENG8Q96PV6 779 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms