RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TMEM199Q8N511 208 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 PROKR1Q8TCW9 393 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 TPD52L3Q96J77 140 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 ACAT2Q9BWD1 397 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 VN1R3Q9BXE9 311 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 RUBCNLQ9H714 662 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 ELAC1Q9H777 363 aaKnown RBP10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 SMURF2Q9HAU4 748 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 SH3BP4Q9P0V3 963 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 ACTR3BQ9P1U1 418 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 COMMD3-BMI1R4GMX3 469 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 SDK1Q7Z5N4 2213 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 FAM92AA1XBS5 289 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 FAM234BA2RU67 622 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 DENRO43583 198 aaKnown RBP10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 DEAF1O75398 565 aaPredicted RBP10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 RPS9P46781 194 aaKnown RBP10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 AP1S1P61966 158 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 PIGFQ07326 219 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 GALNT1Q10472 559 aaPredicted RBP10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 GPNMBQ14956 572 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 ACOX1Q15067 660 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 PLEKHG6Q3KR16 790 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 DGKKQ5KSL6 1271 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 CERS6Q6ZMG9 384 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 Q6ZVL8 140 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 TMEM25Q86YD3 366 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 SLC44A2Q8IWA5 706 aaPredicted RBP10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 OR2AP1Q8NGE2 309 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 PXYLP1Q8TE99 480 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 SLC13A3Q8WWT9 602 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 TMEM125Q96AQ2 219 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 PPP3R2Q96LZ3 170 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 LINC00597Q9H2U6 94 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 ASAH2Q9NR71 780 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 PCDHB1Q9Y5F3 818 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 CROCCQ5TZA2 2017 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 GNG14A0A1W2PPG7 69 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 TRBC1P01850 177 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 GBAP04062 536 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 ANXA6P08133 673 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZDHHC11BP0C7U3 371 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 CR2P20023 1033 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 MSH3P20585 1137 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZXDBP98169 803 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 SLC14A2Q15849 920 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 CHST9Q7L1S5 443 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 TRIM74Q86UV6 250 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 HID1Q8IV36 788 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 TRPV3Q8NET8 790 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 TMEM175Q9BSA9 504 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 CCM2LQ9NUG4 571 aaPredicted RBP10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 IL37Q9NZH6 218 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 MOSPD1Q9UJG1 213 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 CCL26Q9Y258 94 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 ORC6Q9Y5N6 252 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 PDCD11Q14690 1871 aaKnown RBP10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 COL6A1P12109 1028 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 NTHL1P78549 312 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 MTA1Q13330 715 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 GRAMD4Q6IC98 578 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 SYT12Q8IV01 421 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 SYTL1Q8IYJ3 562 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 AHI1Q8N157 1196 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 OSCP1Q8WVF1 389 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 TSEN34Q9BSV6 310 aaKnown RBP10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 LRRC3Q9BY71 257 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 LTB4R2Q9NPC1 389 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 NDUFA13Q9P0J0 144 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 VAPAQ9P0L0 249 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 B4GALT6Q9UBX8 382 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 CD300AQ9UGN4 299 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 TBC1D30Q9Y2I9 924 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 WNT6Q9Y6F9 365 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 CFAP99D6REC4 459 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 K7EPI3 171 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 FXYD1O00168 92 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 SAP18O00422 153 aaKnown RBP10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 STX16O14662 325 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 RSL1D1O76021 490 aaKnown RBP10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 PRKD3O94806 890 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 PABPC4LP0CB38 370 aaKnown RBP10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 PREPP48147 710 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 LSM3P62310 102 aaKnown RBP10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 ACVR1Q04771 509 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 PTCHD3Q3KNS1 767 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 MPPE1Q53F39 396 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 XKR6Q5GH73 641 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZCCHC8Q6NZY4 707 aaKnown RBP10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 DOK6Q6PKX4 331 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 GAREM2Q75VX8 874 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 DCAF4L2Q8NA75 395 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 NUSAP1Q9BXS6 441 aaKnown RBP10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 SUV39H2Q9H5I1 410 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 POPDC3Q9HBV1 291 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 ELOVL2Q9NXB9 296 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 ETAA1Q9NY74 926 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 TCRBV3S1A0A5B6 114 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 TSPAN12O95859 305 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 C8BP07358 591 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms