RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 PREPP48147 710 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 DMPKQ09013 629 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 NFE2L1Q14494 772 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 PCLAFQ15004 111 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 TSNQ15631 228 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 FAM83HQ6ZRV2 1179 aaPredicted RBP16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 AMZ2Q86W34 360 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 GALNT13Q8IUC8 556 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 CFAP206Q8IYR0 622 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 SLC22A15Q8IZD6 547 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 CCDC63Q8NA47 563 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 RDH11Q8TC12 318 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 TMEM159Q96B96 161 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 ATOH8Q96SQ7 321 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 TIMM29Q9BSF4 260 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 CYP4F12Q9HCS2 524 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 AASDHPPTQ9NRN7 309 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 COPG2Q9UBF2 871 aa16.58■□□□□ 0.24
TSPAN4-205ENST00000397406 SPTY2D1-AS1A0A0U1RR47 76 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 PRR19A6NJB7 356 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 KERAO60938 352 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 BPGMP07738 259 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 CPA3P15088 417 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 CD38P28907 300 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 PDHA2P29803 388 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 GNPDA1P46926 289 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 RACK1P63244 317 aaKnown RBP16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 IL9RQ01113 521 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 ALG11Q2TAA5 492 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 SBSNQ6UWP8 590 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 ZYG11AQ6WRX3 759 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 CHST15Q7LFX5 561 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 RASGRP3Q8IV61 690 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 MFSD2AQ8NA29 543 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 STAG3L4Q8TBR4 150 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 CKAP2Q8WWK9 683 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 KLHDC7BQ96G42 594 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 MECRQ9BV79 373 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 CARS2Q9HA77 564 aaKnown RBP16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 TM9SF3Q9HD45 589 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 KLQ9UEF7 1012 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 MOSPD1Q9UJG1 213 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 MID2Q9UJV3 735 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 ADAM21Q9UKJ8 722 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 ADAMTS6Q9UKP5 1117 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 WASF3Q9UPY6 502 aa16.57■□□□□ 0.24
TSPAN4-205ENST00000397406 WDR91A4D1P6 747 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 BIRC5O15392 142 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 CFIP05156 583 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 ACP5P13686 325 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 ALDH3A1P30838 453 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 HOXD12P35452 270 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 SRP54P61011 504 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 BNC1Q01954 994 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 PLOD1Q02809 727 aaPredicted RBP16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 RPA4Q13156 261 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 PTK2BQ14289 1009 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 FZD2Q14332 565 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 PPP1R3AQ16821 1122 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 DUOXA1Q1HG43 343 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 TTC19Q6DKK2 380 aaPredicted RBP16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 IQCHQ86VS3 1027 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 DCP2Q8IU60 420 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 DYDC1Q8WWB3 177 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 TSACCQ96A04 125 aaPredicted RBP16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 OR2M4Q96R27 311 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 MIR1-1HGQ9H1L0 117 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 SLC6A14Q9UN76 642 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 DNAJC16Q9Y2G8 782 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 PLEKHM1Q9Y4G2 1056 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 GPSM3Q9Y4H4 160 aa16.56■□□□□ 0.24
TSPAN4-205ENST00000397406 DLX3O60479 287 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 KCNJ13O60928 360 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 MATN4O95460 622 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 MYL2P10916 166 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 MTHFD2P13995 350 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 OVGP1Q12889 678 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 EIF2B5Q13144 721 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 PDK4Q16654 411 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 UAP1L1Q3KQV9 507 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 WDR45BQ5MNZ6 344 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 METRNLQ641Q3 311 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 PIP4P1Q86T03 277 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 ADAMTSL2Q86TH1 951 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 TAX1BP1Q86VP1 789 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 C10orf107Q8IVU9 208 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 ASB11Q8WXH4 323 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 DLG3Q92796 817 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 NUSAP1Q9BXS6 441 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 CAPS2Q9BXY5 557 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 OR52A5Q9H2C5 316 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 DPEP2Q9H4A9 486 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 CCDC134Q9H6E4 229 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 KLC4Q9NSK0 619 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 SIRPGQ9P1W8 387 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 RNF112Q9ULX5 631 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 ST14Q9Y5Y6 855 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 DGKBQ9Y6T7 804 aa16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 TDRD6O60522 2096 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-205ENST00000397406 NEMP2A6NFY4 417 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms