RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 TBC1D1Q86TI0 1168 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 MYO1HQ8N1T3 1032 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 CFAP61Q8NHU2 1237 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 CABS1Q96KC9 395 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 C12orf66Q96MD2 445 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 INSM2Q96T92 566 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 NLGN3Q9NZ94 848 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 SIRPGQ9P1W8 387 aa23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 EP300Q09472 2414 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-203ENST00000397397 GOLGA8RI6L899 631 aa23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 AGPSO00116 658 aa23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 FOXD2O60548 495 aaPredicted RBP23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 SASH3O75995 380 aa23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 TSPAN12O95859 305 aa23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 GIMD1P0DJR0 217 aa23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 ALPPL2P10696 532 aa23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 IRF9Q00978 393 aa23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 CSHL1Q14406 222 aa23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 IYDQ6PHW0 289 aa23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 CYHR1Q6ZMK1 362 aa23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 SPATA6LQ8N4H0 392 aa23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 PCMTD2Q9NV79 361 aa23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 RUVBL2Q9Y230 463 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 PCDHGB2Q9Y5G2 931 aa23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 CFAP20Q9Y6A4 193 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 CABIN1Q9Y6J0 2220 aa23.06■■□□□ 1.28
TSPAN4-203ENST00000397397 OR5K4A6NMS3 321 aa23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 OR52A4PA6NMU1 304 aa23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 PYGBP11216 843 aa23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 ACADLP28330 430 aa23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 RPE65Q16518 533 aa23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 C6orf132Q5T0Z8 1188 aa23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 TRABD2AQ86V40 505 aa23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 SFTPA2Q8IWL1 248 aa23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 NAGSQ8N159 534 aa23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 ACMSDQ8TDX5 336 aa23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 PATE1Q8WXA2 126 aa23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 TFGQ92734 400 aaPredicted RBP23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 PDLIM5Q96HC4 596 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 UBXN10Q96LJ8 280 aa23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 FOPNLQ96NB1 174 aa23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 DUSP23Q9BVJ7 150 aa23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 IMP3Q9NV31 184 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-203ENST00000397397 GVINP1Q7Z2Y8 2422 aa23.04■■□□□ 1.28
TSPAN4-203ENST00000397397 LTA4HP09960 611 aaKnown RBP23.04■■□□□ 1.28
TSPAN4-203ENST00000397397 SLC26A3P40879 764 aa23.04■■□□□ 1.28
TSPAN4-203ENST00000397397 EID2Q8N6I1 236 aa23.04■■□□□ 1.28
TSPAN4-203ENST00000397397 OR4C6Q8NH72 309 aa23.04■■□□□ 1.28
TSPAN4-203ENST00000397397 KCTD4Q8WVF5 259 aa23.04■■□□□ 1.28
TSPAN4-203ENST00000397397 CXorf40BQ96DE9 158 aa23.04■■□□□ 1.28
TSPAN4-203ENST00000397397 PGM2Q96G03 612 aa23.04■■□□□ 1.28
TSPAN4-203ENST00000397397 UNKQ9C0B0 810 aaKnown RBP23.04■■□□□ 1.28
TSPAN4-203ENST00000397397 DERL2Q9GZP9 239 aa23.04■■□□□ 1.28
TSPAN4-203ENST00000397397 ACBD3Q9H3P7 528 aa23.04■■□□□ 1.28
TSPAN4-203ENST00000397397 TMBIM4Q9HC24 238 aa23.04■■□□□ 1.28
TSPAN4-203ENST00000397397 KIR2DS5A0A0G2JLQ3 304 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 A0A0G2JNG1 304 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 KIR2DS3K7RE56 304 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 TRIM38O00635 465 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 MTHFD1P11586 935 aaKnown RBP23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 DLG1Q12959 904 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 KIR2DS5Q14953 304 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 DUS1LQ6P1R4 473 aaKnown RBP23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 OGFOD3Q6PK18 319 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 TRIM48Q8IWZ4 208 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 SRRM1Q8IYB3 904 aaKnown RBP23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 CENPLQ8N0S6 344 aaPredicted RBP23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 SFRP1Q8N474 314 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 PHC3Q8NDX5 983 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 MAPK15Q8TD08 544 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 NXNL1Q96CM4 212 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 TSNARE1Q96NA8 513 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 FERD3LQ96RJ6 166 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 IGSF5Q9NSI5 407 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 ZNF624Q9P2J8 865 aaPredicted RBP23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 ASF1AQ9Y294 204 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 HEBP2Q9Y5Z4 205 aa23.03■■□□□ 1.28
TSPAN4-203ENST00000397397 NOBOXO60393 691 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 KLHL2O95198 593 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 MATN4O95460 622 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 COL6A2P12110 1019 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 CD1DP15813 335 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 SLC19A1P41440 591 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 MAPK9P45984 424 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 ATP6V0D1P61421 351 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 KRT33BQ14525 404 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 FAM83EQ2M2I3 478 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 INAVAQ3KP66 663 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 ZCCHC8Q6NZY4 707 aaKnown RBP23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 UNC5DQ6UXZ4 953 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 C4orf33Q8N1A6 199 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 PLD6Q8N2A8 252 aaKnown RBP23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 KYQ8NBH2 561 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 SLC37A2Q8TED4 501 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 STMN4Q9H169 189 aaPredicted RBP23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 NMRAL1Q9HBL8 299 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 IKZF3Q9UKT9 509 aa23.02■■□□□ 1.28
TSPAN4-203ENST00000397397 NPEPPSL1A6NEC2 478 aa23.01■■□□□ 1.27
TSPAN4-203ENST00000397397 C4orf47A7E2U8 309 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms