RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 CPA3P15088 417 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 HIST1H2ADP20671 130 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 ACTR1BP42025 376 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 SERPINB4P48594 390 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 PRKAA2P54646 552 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 AP1S2P56377 157 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 ACTR1AP61163 376 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 DUOXA1Q1HG43 343 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 TUBB8Q3ZCM7 444 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 CDKL4Q5MAI5 379 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 TTC23LQ6PF05 361 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 LAYNQ6UX15 382 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 ZYG11AQ6WRX3 759 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 UBE2R2Q712K3 238 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 FBXO15Q8NCQ5 510 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 MCOLN3Q8TDD5 553 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 HIST1H2AHQ96KK5 128 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 ATOH8Q96SQ7 321 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 HIST1H2AJQ99878 128 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 PAIP2Q9BPZ3 127 aaKnown RBP23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 H2AFJQ9BTM1 129 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 TMEM168Q9H0V1 697 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 PARVBQ9HBI1 364 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 SPASTQ9UBP0 616 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 TSR3Q9UJK0 312 aaKnown RBP23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 PCOLCE2Q9UKZ9 415 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 HEBP2Q9Y5Z4 205 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 TARM1B6A8C7 271 aa23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 GFYI3L273 518 aa23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 ATP5F1P24539 256 aaPredicted RBP23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 PDHA2P29803 388 aa23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 IRX4P78413 519 aa23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 CDKL1Q00532 357 aa23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 OR4D1Q15615 310 aa23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 UAP1L1Q3KQV9 507 aa23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 SBSNQ6UWP8 590 aa23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 XKR5Q6UX68 686 aa23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 TAX1BP1Q86VP1 789 aa23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 MDM1Q8TC05 714 aa23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 CPSF2Q9P2I0 782 aaKnown RBP23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 PNMA8BQ9ULN7 279 aaPredicted RBP23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 PCDHGA5Q9Y5G8 931 aa23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 SPAG17Q6Q759 2223 aa23.03■■□□□ 1.28
TSPAN4-202ENST00000397396 CUL9Q8IWT3 2517 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 A0A1B0GVT2 93 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 SUPT3HB4E1H0 165 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 DFNA5O60443 496 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 SNX2O60749 519 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 H2AFYO75367 372 aaKnown RBP23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 SUPT3HO75486 399 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 ACADLP28330 430 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 CTSKP43235 329 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 ARRB1P49407 418 aaPredicted RBP23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 NFKB2Q00653 900 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 ABRQ12979 859 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 TGFBIQ15582 683 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 PPP1R3AQ16821 1122 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 ABRAXAS1Q6UWZ7 409 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 RAB44Q7Z6P3 723 aaPredicted RBP23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 GKN2Q86XP6 184 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 RAB3IL1Q8TBN0 382 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 TFGQ92734 400 aaPredicted RBP23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 WWP1Q9H0M0 922 aa23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 C12orf65Q9H3J6 166 aaKnown RBP23.02■■□□□ 1.28
TSPAN4-202ENST00000397396 YKT6O15498 198 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 KDM1AO60341 852 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 BPGMP07738 259 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 NEFHP12036 1026 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 NDUFS1P28331 727 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 WDR4P57081 412 aaKnown RBP23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 CAPRIN2Q6IMN6 1127 aaKnown RBP23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 IL27RAQ6UWB1 636 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 TAF8Q7Z7C8 310 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 RASGRP3Q8IV61 690 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 NUDCD3Q8IVD9 361 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 TCAIMQ8N3R3 496 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 TMEM151AQ8N4L1 468 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 LRRC61Q9BV99 259 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 ZDHHC5Q9C0B5 715 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 IRF2BPLQ9H1B7 796 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 CD274Q9NZQ7 290 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 ASF1AQ9Y294 204 aa23.01■■□□□ 1.27
TSPAN4-202ENST00000397396 OR5K4A6NMS3 321 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 G3V2L1 256 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 POLR3GO15318 223 aaPredicted RBP23■■□□□ 1.27
TSPAN4-202ENST00000397396 FFAR2O15552 330 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 EPN2O95208 641 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 ANXA5P08758 320 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 GFAPP14136 432 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 RPIAP49247 311 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 NAA20P61599 178 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 PCLAFQ15004 111 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 ZNF542PQ5EBM4 170 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 PRRT3Q5FWE3 981 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 SLC30A9Q6PML9 568 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 DCUN1D3Q8IWE4 304 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 FBXO39Q8N4B4 442 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 AVL9Q8NBF6 648 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 CFAP61Q8NHU2 1237 aa23■■□□□ 1.27
TSPAN4-202ENST00000397396 ATL1Q8WXF7 558 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms