RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 BPTFQ12830 3046 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 IFRD1O00458 451 aaPredicted RBP14.22□□□□□ -0.13
SEC13-208ENST00000397109 CAPN5O15484 640 aaPredicted RBP14.22□□□□□ -0.13
SEC13-208ENST00000397109 GOT2P00505 430 aaKnown RBP14.22□□□□□ -0.13
SEC13-208ENST00000397109 FTH1P02794 183 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 FAM153BP0C7A2 387 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 PRSS56P0CW18 603 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 CAPZBP47756 277 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 VPS41P49754 854 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 EIF3BP55884 814 aaKnown RBP14.22□□□□□ -0.13
SEC13-208ENST00000397109 SESN2P58004 480 aaPredicted RBP14.22□□□□□ -0.13
SEC13-208ENST00000397109 MC2RQ01718 297 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 KRT33BQ14525 404 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 PLCL1Q15111 1095 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 FAM153CQ494X1 144 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 FASTKD1Q53R41 847 aaKnown RBP14.22□□□□□ -0.13
SEC13-208ENST00000397109 DCAF12Q5T6F0 453 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 ARMC3Q5W041 872 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 LRRC8BQ6P9F7 803 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 GPR150Q8NGU9 434 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 NAT14Q8WUY8 206 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 CPT1BQ92523 772 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 TEFMQ96QE5 360 aaKnown RBP14.22□□□□□ -0.13
SEC13-208ENST00000397109 ZPBPQ9BS86 351 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 TRIM51Q9BSJ1 452 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 COG4Q9H9E3 785 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 SLC2A6Q9UGQ3 507 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 KLHL3Q9UH77 587 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 ANAPC5Q9UJX4 755 aa14.22□□□□□ -0.13
SEC13-208ENST00000397109 OR51F1A6NGY5 319 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.21□□□□□ -0.13
SEC13-208ENST00000397109 AGPSO00116 658 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 SMAPO00193 183 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 DNALI1O14645 258 aaPredicted RBP14.21□□□□□ -0.13
SEC13-208ENST00000397109 SYF2O95926 243 aaKnown RBP14.21□□□□□ -0.13
SEC13-208ENST00000397109 OR56A5P0C7T3 313 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 CD151P48509 253 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 GFERP55789 205 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 TRADDQ15628 312 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 TUBB8Q3ZCM7 444 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 AARS2Q5JTZ9 985 aaKnown RBP14.21□□□□□ -0.13
SEC13-208ENST00000397109 RNASEH2BQ5TBB1 312 aaKnown RBP14.21□□□□□ -0.13
SEC13-208ENST00000397109 GPR155Q7Z3F1 870 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 PCGF5Q86SE9 256 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 HOOK3Q86VS8 718 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 CLDN19Q8N6F1 224 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 NAT8LQ8N9F0 302 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 RSC1A1Q92681 617 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 SNF8Q96H20 258 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 RMDN2Q96LZ7 410 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 ZNF778Q96MU6 729 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 FCRL3Q96P31 734 aaPredicted RBP14.21□□□□□ -0.13
SEC13-208ENST00000397109 TGM7Q96PF1 710 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 CCNL2Q96S94 520 aaPredicted RBP14.21□□□□□ -0.13
SEC13-208ENST00000397109 TXLNGYQ9BZA5 131 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 DPH5Q9H2P9 285 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 KIR3DX1Q9H7L2 352 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 MRM3Q9HC36 420 aaKnown RBP14.21□□□□□ -0.13
SEC13-208ENST00000397109 FBXO8Q9NRD0 319 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 OCIAD1Q9NX40 245 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 GRHL1Q9NZI5 618 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 FOXJ2Q9P0K8 574 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 SNX24Q9Y343 169 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 CFAP20Q9Y6A4 193 aaKnown RBP14.21□□□□□ -0.13
SEC13-208ENST00000397109 ITPR1Q14643 2758 aa14.21□□□□□ -0.13
SEC13-208ENST00000397109 CACNA1GO43497 2377 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 STMND1H3BQB6 276 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 LIN7AO14910 233 aaPredicted RBP14.2□□□□□ -0.14
SEC13-208ENST00000397109 TP73O15350 636 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 RPL21P46778 160 aaKnown RBP14.2□□□□□ -0.14
SEC13-208ENST00000397109 CXADRP78310 365 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 PLOD1Q02809 727 aaPredicted RBP14.2□□□□□ -0.14
SEC13-208ENST00000397109 VAC14Q08AM6 782 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 KCTD19Q17RG1 926 aaPredicted RBP14.2□□□□□ -0.14
SEC13-208ENST00000397109 ZNF658BQ4V348 819 aaPredicted RBP14.2□□□□□ -0.14
SEC13-208ENST00000397109 XKR5Q6UX68 686 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 CEACAM20Q6UY09 585 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 PRSS42Q7Z5A4 293 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 PPIL6Q8IXY8 311 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 LILRA3Q8N6C8 439 aaPredicted RBP14.2□□□□□ -0.14
SEC13-208ENST00000397109 BMPERQ8N8U9 685 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 MCUQ8NE86 351 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 SPDYE1Q8NFV5 336 aaPredicted RBP14.2□□□□□ -0.14
SEC13-208ENST00000397109 CRELD1Q96HD1 420 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 CD180Q99467 661 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 OR52A5Q9H2C5 316 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 CHRAC1Q9NRG0 131 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 SLC24A2Q9UI40 661 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 B3GALT1Q9Y5Z6 326 aa14.2□□□□□ -0.14
SEC13-208ENST00000397109 TEX51A0A1B0GUA7 166 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 RASSF9O75901 435 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 TMEM63AO94886 807 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 TTPAP49638 278 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 PLTPP55058 493 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 MORF4L2Q15014 288 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 CACHD1Q5VU97 1274 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 ARMC6Q6NXE6 501 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 IRGCQ6NXR0 463 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 ZDHHC24Q6UX98 284 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 MICALCLQ6ZW33 695 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms