RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 CBX8Q9HC52 389 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 SLC6A20Q9NP91 592 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 OLAHQ9NV23 265 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 FANCLQ9NW38 375 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.16□□□□□ -1.15e-7■■■□□ 17.9
SCFD1-202ENST00000396629 IFT80Q9P2H3 777 aaPredicted RBP8.16□□□□□ -1.1
SCFD1-202ENST00000396629 CDYLQ9Y232 598 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 HEBP2Q9Y5Z4 205 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 AP1M2Q9Y6Q5 423 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 NCOA6Q14686 2063 aaPredicted RBP8.16□□□□□ -1.1
SCFD1-202ENST00000396629 CCDC78A2IDD5 438 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 KCNK1O00180 336 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 BTN3A3O00478 584 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 BTN3A1O00481 513 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 SNRPB2P08579 225 aaKnown RBP8.15□□□□□ -1.1
SCFD1-202ENST00000396629 CAPN3P20807 821 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 PBLDP30039 288 aaPredicted RBP8.15□□□□□ -1.1
SCFD1-202ENST00000396629 SSTR2P30874 369 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 PRKCIP41743 596 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 GABRA4P48169 554 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 TLR1Q15399 786 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 ATP13A4Q4VNC1 1196 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 GPRC6AQ5T6X5 926 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 C1orf189Q5VU69 101 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 MRGPRGQ86SM5 289 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 NT5DC3Q86UY8 548 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 GPR135Q8IZ08 494 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 PQLC3Q8N755 202 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 CCNYQ8ND76 341 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 ACVR1CQ8NER5 493 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 CCDC120Q96HB5 630 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 BTBD6Q96KE9 485 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 AP1M1Q9BXS5 423 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 SPRTNQ9H040 489 aaPredicted RBP8.15□□□□□ -1.1
SCFD1-202ENST00000396629 SLC25A51Q9H1U9 297 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 SRMSQ9H3Y6 488 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 SUCOQ9UBS9 1254 aaKnown RBP8.15□□□□□ -1.1
SCFD1-202ENST00000396629 IP6K2Q9UHH9 426 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 CNTRLQ7Z7A1 2325 aa8.15□□□□□ -1.1
SCFD1-202ENST00000396629 CCDC168Q8NDH2 2452 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 GSAPA4D1B5 854 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 GAPDHSO14556 408 aaPredicted RBP8.15□□□□□ -1.11
SCFD1-202ENST00000396629 SLC35G4P0C7Q5 338 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 PYGMP11217 842 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 PVRP15151 417 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 SPAM1P38567 509 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 KCNK10P57789 538 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 FOXL2P58012 376 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 PDK2Q15119 407 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 ASIC2Q16515 512 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 PCSK7Q16549 785 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 FNBP1LQ5T0N5 605 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 RPTNQ6XPR3 784 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 APTXQ7Z2E3 356 aaKnown RBP8.15□□□□□ -1.11
SCFD1-202ENST00000396629 LCN9Q8WX39 176 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 CNDP1Q96KN2 507 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 LINC00615Q96LM1 132 aaPredicted RBP8.15□□□□□ -1.11
SCFD1-202ENST00000396629 CCM2Q9BSQ5 444 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 CHRNA10Q9GZZ6 450 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 LHPPQ9H008 270 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 TRABDQ9H4I3 376 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 TFB2MQ9H5Q4 396 aaKnown RBP8.15□□□□□ -1.11
SCFD1-202ENST00000396629 EPS8L2Q9H6S3 715 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 SMOXQ9NWM0 555 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 AIPL1Q9NZN9 384 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 IL17CQ9P0M4 197 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 FBXL4Q9UKA2 621 aa8.15□□□□□ -1.11
SCFD1-202ENST00000396629 LRRC53A6NM62 1247 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 SOCS6O14544 535 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 GPR39O43194 453 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 PRICKLE3O43900 615 aaPredicted RBP8.14□□□□□ -1.11
SCFD1-202ENST00000396629 SNRNP200O75643 2136 aaKnown RBP8.14□□□□□ -1.11
SCFD1-202ENST00000396629 OR2B3O76000 313 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 MMP11P24347 488 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 ITGA9Q13797 1035 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 KRT33BQ14525 404 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 HADHQ16836 314 aaKnown RBP8.14□□□□□ -1.11
SCFD1-202ENST00000396629 LONRF2Q1L5Z9 754 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 NKAIN1Q4KMZ8 207 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 BCL7AQ4VC05 210 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 VWA2Q5GFL6 755 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 FAM182AQ5T1J6 154 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 CCDC70Q6NSX1 233 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 MTFR2Q6P444 385 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 KCTD6Q8NC69 237 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 CATSPER1Q8NEC5 780 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 ANKRD20A12PQ8NF67 263 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 NR4A3Q92570 626 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 MS4A3Q96HJ5 214 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 LMF1Q96S06 567 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 KLHL25Q9H0H3 589 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 FAM60AQ9NP50 221 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 SLC22A11Q9NSA0 550 aa8.14□□□□□ -1.11
SCFD1-202ENST00000396629 GLYATL1P3A0A0U1RQE8 302 aa8.13□□□□□ -1.11
SCFD1-202ENST00000396629 C2orf74A8MZ97 194 aa8.13□□□□□ -1.11
SCFD1-202ENST00000396629 CCL21O00585 134 aa8.13□□□□□ -1.11
SCFD1-202ENST00000396629 HCRTR1O43613 425 aa8.13□□□□□ -1.11
SCFD1-202ENST00000396629 SGTAO43765 313 aa8.13□□□□□ -1.11
SCFD1-202ENST00000396629 ALOX12BO75342 701 aa8.13□□□□□ -1.11
SCFD1-202ENST00000396629 ONECUT2O95948 504 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms