RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 PRSS51A0A1B0GVH4 220 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 CCDC154A6NI56 674 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 FADS2P1A8MWK0 482 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 SLC28A1O00337 649 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 SLC16A5O15375 505 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 RGS14O43566 566 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 PEX1O43933 1283 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 MTX2O75431 263 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 ELFN1P0C7U0 828 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 CYP2A7P20853 494 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 ZFP36L2P47974 494 aaKnown RBP14.65□□□□□ -0.06
CBX3-202ENST00000396386 ERVK-21P61565 698 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 UFM1P61960 85 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 BLMHQ13867 455 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 NFYCQ13952 458 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 ABRAXAS2Q15018 415 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 LRRC36Q1X8D7 754 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 POM121L1PQ3SYA9 428 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 FAM78AQ5JUQ0 283 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 C6orf10Q5SRN2 563 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 OGFRL1Q5TC84 451 aaPredicted RBP14.65□□□□□ -0.06
CBX3-202ENST00000396386 SERPINA13PQ6UXR4 307 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 NEK10Q6ZWH5 1172 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 ELMO1Q92556 727 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 HBEGFQ99075 208 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 PCDHAC1Q9H158 963 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 MBD1Q9UIS9 605 aaPredicted RBP14.65□□□□□ -0.06
CBX3-202ENST00000396386 RIMS3Q9UJD0 308 aa14.65□□□□□ -0.06
CBX3-202ENST00000396386 POLR3HQ9Y535 204 aaPredicted RBP14.65□□□□□ -0.06
CBX3-202ENST00000396386 DENND4AQ7Z401 1863 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 PSMD11O00231 422 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 KPNA3O00505 521 aaPredicted RBP14.64□□□□□ -0.07
CBX3-202ENST00000396386 NME4O00746 187 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 PAPLNO95428 1278 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 PRNPP04156 253 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 HIST1H2AGP0C0S8 130 aaPredicted RBP14.64□□□□□ -0.07
CBX3-202ENST00000396386 HIST1H2ADP20671 130 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 GGT5P36269 586 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 MRPS35P82673 323 aaKnown RBP14.64□□□□□ -0.07
CBX3-202ENST00000396386 DUSP6Q16828 381 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 GRAMD1BQ3KR37 738 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 SPATS1Q496A3 300 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 FNDC3BQ53EP0 1204 aaKnown RBP14.64□□□□□ -0.07
CBX3-202ENST00000396386 LDLRAP1Q5SW96 308 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 FAM109BQ6ICB4 259 aaPredicted RBP14.64□□□□□ -0.07
CBX3-202ENST00000396386 TECPR1Q7Z6L1 1165 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 ZFAND4Q86XD8 727 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 ASB11Q8WXH4 323 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 NXPE3Q969Y0 559 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 LRRC58Q96CX6 371 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 HIST1H2AHQ96KK5 128 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 TEX37Q96LM6 180 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 ASB16Q96NS5 453 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 VPS35Q96QK1 796 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 HIST1H2AJQ99878 128 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 H2AFJQ9BTM1 129 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 SLC32A1Q9H598 525 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 KLQ9UEF7 1012 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 DTNAQ9Y4J8 743 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 LRRK1Q38SD2 2015 aa14.64□□□□□ -0.07
CBX3-202ENST00000396386 TCF20Q9UGU0 1960 aaKnown RBP14.64□□□□□ -0.07
CBX3-202ENST00000396386 DYTNA2CJ06 578 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 ASPDHA6ND91 283 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 VGLL3A8MV65 326 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 FFAR3O14843 346 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 GPR42O15529 346 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 FSHRP23945 695 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 HNMTP50135 292 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 CREB5Q02930 508 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 BNIP2Q12982 314 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 MAD2L1Q13257 205 aaPredicted RBP14.63□□□□□ -0.07
CBX3-202ENST00000396386 CAPRIN1Q14444 709 aaKnown RBP14.63□□□□□ -0.07
CBX3-202ENST00000396386 ACOX1Q15067 660 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 SMU1Q2TAY7 513 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 AP5B1Q2VPB7 878 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 TIGD2Q4W5G0 525 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 SFT2D3Q587I9 215 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 LIPIQ6XZB0 460 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 VRK3Q8IV63 474 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 NRSN1Q8IZ57 195 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 CATSPER1Q8NEC5 780 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 BTN2A2Q8WVV5 523 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 SMARCD2Q92925 531 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 PPP2R3CQ969Q6 453 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 VPS33AQ96AX1 596 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 LRCH3Q96II8 777 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 TRIM15Q9C019 465 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 EBF3Q9H4W6 596 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 MYO7AQ13402 2215 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 RANBP2P49792 3224 aaKnown RBP14.63□□□□□ -0.07
CBX3-202ENST00000396386 EDDM13A0A1B0GTR0 161 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 GRXCR2A6NFK2 248 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 MANBAO00462 879 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 SGTAO43765 313 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 CLDN9O95484 217 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 HSD17B1P14061 328 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 NRIP1P48552 1158 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 AQP4P55087 323 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 AP1S2P56377 157 aa14.63□□□□□ -0.07
CBX3-202ENST00000396386 RPL38P63173 70 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms