RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 TRMT6Q9UJA5 497 aaKnown RBP18.73■□□□□ 0.59
HOXA9-202ENST00000396345 DHRS7Q9Y394 339 aa18.73■□□□□ 0.59
HOXA9-202ENST00000396345 V9GYY5 206 aaPredicted RBP18.73■□□□□ 0.59
HOXA9-202ENST00000396345 UNC13CQ8NB66 2214 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 IGHV1OR21-1A0A087WYE8 117 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 A0A1W2PQM1 296 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 NTN3O00634 580 aaPredicted RBP18.72■□□□□ 0.59
HOXA9-202ENST00000396345 MYBL2P10244 700 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 CD1CP29017 333 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 ATP5DP30049 168 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 MAPK9P45984 424 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 PPM1FP49593 454 aaPredicted RBP18.72■□□□□ 0.59
HOXA9-202ENST00000396345 CDKN2DP55273 166 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 CLDN6P56747 220 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 GPLD1P80108 840 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 ILF2Q12905 390 aaKnown RBP18.72■□□□□ 0.59
HOXA9-202ENST00000396345 FOXC1Q12948 553 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 ABRQ12979 859 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 NAB1Q13506 487 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 SPIDRQ14159 915 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 GBX1Q14549 363 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 HES3Q5TGS1 186 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 HECTD2Q5U5R9 776 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 NKAIN2Q5VXU1 208 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 FAM45BPQ6NSW5 357 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 CCNI2Q6ZMN8 369 aaPredicted RBP18.72■□□□□ 0.59
HOXA9-202ENST00000396345 OR10G6Q8NH81 332 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 GIMAP7Q8NHV1 300 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 FAM45AQ8TCE6 357 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 SKA2Q8WVK7 121 aaPredicted RBP18.72■□□□□ 0.59
HOXA9-202ENST00000396345 AHCYL2Q96HN2 611 aaKnown RBP18.72■□□□□ 0.59
HOXA9-202ENST00000396345 ELMO2Q96JJ3 720 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 CYTH2Q99418 400 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 RHOJQ9H4E5 214 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 ASF1AQ9Y294 204 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 VWA7Q9Y334 891 aa18.72■□□□□ 0.59
HOXA9-202ENST00000396345 TCEA3O75764 348 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 MT-CO3P00414 261 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 CD9P21926 228 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 GP5P40197 560 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 SKIV2L2P42285 1042 aaKnown RBP18.71■□□□□ 0.59
HOXA9-202ENST00000396345 TIAL1Q01085 375 aaKnown RBP eCLIP18.71■□□□□ 0.59
HOXA9-202ENST00000396345 EFTUD2Q15029 972 aaKnown RBP eCLIP18.71■□□□□ 0.59
HOXA9-202ENST00000396345 ACSBG2Q5FVE4 666 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 CDCP2Q5VXM1 449 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 RBM44Q6ZP01 1051 aaKnown RBP18.71■□□□□ 0.59
HOXA9-202ENST00000396345 TRMT10CQ7L0Y3 403 aaKnown RBP18.71■□□□□ 0.59
HOXA9-202ENST00000396345 TMPRSS12Q86WS5 348 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 TBC1D21Q8IYX1 336 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 GALNT15Q8N3T1 639 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 CFAP61Q8NHU2 1237 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 CD200R1Q8TD46 325 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.71■□□□□ 0.59
HOXA9-202ENST00000396345 VPS39Q96JC1 886 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 MCMBPQ9BTE3 642 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 FUT8Q9BYC5 575 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 TRIT1Q9H3H1 467 aaKnown RBP18.71■□□□□ 0.59
HOXA9-202ENST00000396345 EPB41L1Q9H4G0 881 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 ACSS3Q9H6R3 686 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 KIR3DX1Q9H7L2 352 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 SLC24A2Q9UI40 661 aa18.71■□□□□ 0.59
HOXA9-202ENST00000396345 TSR3Q9UJK0 312 aaKnown RBP18.71■□□□□ 0.59
HOXA9-202ENST00000396345 ATXN7L1Q9ULK2 861 aaPredicted RBP18.71■□□□□ 0.59
HOXA9-202ENST00000396345 FAM95CA0A1B0GW59 222 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 DUX1O43812 170 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 UBXN7O94888 489 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 SAT1P21673 171 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 FDXRP22570 491 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 PMS2P54278 862 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 PRKG2Q13237 762 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 PLCL1Q15111 1095 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 ERCC6LQ2NKX8 1250 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 GRTP1Q5TC63 336 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 UNC5DQ6UXZ4 953 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 USP53Q70EK8 1073 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 TMPRSS7Q7RTY8 843 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 PIM3Q86V86 326 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 ACVR1CQ8NER5 493 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 OR5AR1Q8NGP9 310 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 JPH3Q8WXH2 748 aaPredicted RBP18.7■□□□□ 0.58
HOXA9-202ENST00000396345 FOPNLQ96NB1 174 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 RBBP8Q99708 897 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 HGH1Q9BTY7 390 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 TXLNGYQ9BZA5 131 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 ZMYND15Q9H091 742 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 POLG2Q9UHN1 485 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 CLCA2Q9UQC9 943 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 PTPRBP23467 1997 aa18.7■□□□□ 0.58
HOXA9-202ENST00000396345 A0A087WUV0 522 aaPredicted RBP18.69■□□□□ 0.58
HOXA9-202ENST00000396345 D6RAR5 112 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 HYAL3O43820 417 aaPredicted RBP18.69■□□□□ 0.58
HOXA9-202ENST00000396345 FAM155BO75949 473 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 CPNE6O95741 557 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 TOP3BO95985 862 aaKnown RBP18.69■□□□□ 0.58
HOXA9-202ENST00000396345 RPN2P04844 631 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 PROS1P07225 676 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 ADRB1P08588 477 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 CBSLP0DN79 551 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 ENO3P13929 434 aaPredicted RBP18.69■□□□□ 0.58
HOXA9-202ENST00000396345 JUPP14923 745 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms