RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CLCN7P51798 805 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 PKNOX1P55347 436 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 HERVK_113P63132 956 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 DSC2Q02487 901 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 DPTQ07507 201 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 FOXM1Q08050 763 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 XKR7Q5GH72 579 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 MTX3Q5HYI7 312 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 MROH9Q5TGP6 573 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 ASTLQ6HA08 431 aaPredicted RBP5.27□□□□□ -1.57
VPS41-203ENST00000395969 UGT3A1Q6NUS8 523 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 ESRP1Q6NXG1 681 aaKnown RBP5.27□□□□□ -1.57
VPS41-203ENST00000395969 HEATR4Q86WZ0 1026 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 SNX32Q86XE0 403 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 C10orf107Q8IVU9 208 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 ZC3H7AQ8IWR0 971 aaKnown RBP5.27□□□□□ -1.57
VPS41-203ENST00000395969 PEX5LQ8IYB4 626 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 PACRGLQ8N7B6 248 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 OR13F1Q8NGS4 319 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 MAPK15Q8TD08 544 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 HPS1Q92902 700 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 SCRN2Q96FV2 425 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 MYO19Q96H55 970 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 FRMD6Q96NE9 622 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 RPRD1AQ96P16 312 aaPredicted RBP5.27□□□□□ -1.57
VPS41-203ENST00000395969 SEPT5Q99719 369 aaPredicted RBP5.27□□□□□ -1.57
VPS41-203ENST00000395969 HTATIP2Q9BUP3 242 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 ERVK-6Q9BXR3 956 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 SEMA6AQ9H2E6 1030 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 MARCH7Q9H992 704 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 WDR41Q9HAD4 459 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 SLC52A3Q9NQ40 469 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 C20orf96Q9NUD7 363 aaPredicted RBP5.27□□□□□ -1.57
VPS41-203ENST00000395969 DAPK2Q9UIK4 370 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 POU2F3Q9UKI9 436 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 VWA7Q9Y334 891 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 PCM1Q15154 2024 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 C2orf78A6NCI8 922 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 TRPC5OSA6NMA1 111 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 NOTOA8MTQ0 251 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 LEFTY2O00292 366 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 SOCS2O14508 198 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 GRID2O43424 1007 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 KLHL41O60662 606 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 UGDHO60701 494 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 WDR47O94967 919 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 MTHFD2P13995 350 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 HNRNPLP14866 589 aaKnown RBP eCLIP5.27□□□□□ -1.576e-15■■■■■ 32.5
VPS41-203ENST00000395969 JUNBP17275 347 aaPredicted RBP5.27□□□□□ -1.57
VPS41-203ENST00000395969 CCNA2P20248 432 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 SLC7A1P30825 629 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 HPCAL1P37235 193 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 CD86P42081 329 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 FOXK1P85037 733 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 PPP1R3AQ16821 1122 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 SLC36A3Q495N2 470 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 TIGD2Q4W5G0 525 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 PAN2Q504Q3 1202 aaKnown RBP5.27□□□□□ -1.57
VPS41-203ENST00000395969 INTS11Q5TA45 600 aaKnown RBP5.27□□□□□ -1.57
VPS41-203ENST00000395969 HECTD2Q5U5R9 776 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 GALNT18Q6P9A2 607 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 LINC00299Q6ZSB3 139 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 FKBP9P1Q75LS8 142 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 DPPA4Q7L190 304 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 ADIPOR2Q86V24 386 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 SNX29P2Q8IUI4 249 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 PHYKPLQ8IUZ5 450 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 ELMOD1Q8N336 334 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 KREMEN2Q8NCW0 462 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 FLCNQ8NFG4 579 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 MDGA1Q8NFP4 955 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 OR4L1Q8NH43 312 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 LILRB4Q8NHJ6 448 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 SPATA22Q8NHS9 363 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 CAPSLQ8WWF8 208 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 MRPS31Q92665 395 aaKnown RBP5.27□□□□□ -1.57
VPS41-203ENST00000395969 RCN3Q96D15 328 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 WDR34Q96EX3 536 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 OR52B2Q96RD2 323 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 AGAP2Q99490 1192 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 SEMA3CQ99985 751 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 CINPQ9BW66 212 aaPredicted RBP5.27□□□□□ -1.57
VPS41-203ENST00000395969 FSD1LQ9BXM9 530 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 GSTO2Q9H4Y5 243 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 SCUBE2Q9NQ36 999 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 THG1LQ9NWX6 298 aaKnown RBP5.27□□□□□ -1.57
VPS41-203ENST00000395969 HCSTQ9UBK5 93 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 CARD8Q9Y2G2 431 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 SLC27A5Q9Y2P5 690 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 DHRS7Q9Y394 339 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 PCDHGB3Q9Y5G1 929 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 GOLGA8CPA6NN73 597 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 C2orf81A6NN90 581 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 HDAC3O15379 428 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 CD3EAPO15446 510 aaKnown RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 CLOCKO15516 846 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 XYLBO75191 536 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 MT-CYBP00156 380 aaPredicted RBP5.26□□□□□ -1.57
VPS41-203ENST00000395969 GNAO1P09471 354 aa5.26□□□□□ -1.57
VPS41-203ENST00000395969 RALBP11234 206 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms