RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 HSPB3Q12988 150 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 SWI5Q1ZZU3 235 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 LACTB2Q53H82 288 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 FOXR1Q6PIV2 292 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 CCDC54Q8NEL0 328 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 CLHC1Q8NHS4 586 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 EXOSC8Q96B26 276 aaKnown RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 MGME1Q9BQP7 344 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 TAPBPLQ9BX59 468 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 TFB2MQ9H5Q4 396 aaKnown RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PACSIN3Q9UKS6 424 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PCDHGC4Q9Y5F7 938 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PRORSD1PA6NEY8 169 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 FAM25EA8MYX2 175 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PLIN3O60664 434 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 CCNE2O96020 404 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 RB1P06400 928 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 TACSTD2P09758 323 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 RAP2AP10114 183 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 DNAJB1P25685 340 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 IDH3AP50213 366 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 CLCN4P51793 760 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 NRG3P56975 720 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 CAP1Q01518 475 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 FASTKD3Q14CZ7 662 aaKnown RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PERM1Q5SV97 790 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 RFWD3Q6PCD5 774 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 GDPD4Q6W3E5 623 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 QSOX2Q6ZRP7 698 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 LINC00471Q8N535 108 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 SPATA22Q8NHS9 363 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 VANGL1Q8TAA9 524 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 C8orf48Q96LL4 319 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PWWP2AQ96N64 755 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 CAMK1GQ96NX5 476 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 C11orf84Q9BUA3 381 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 CST11Q9H112 138 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 SLC35C2Q9NQQ7 365 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 SPATA7Q9P0W8 599 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 MED31Q9Y3C7 131 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PDPK1O15530 556 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 GADD45GO95257 159 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 NADKO95544 446 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 ELNP15502 786 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 NRG1Q02297 640 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF155Q12901 538 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 SLC9B1Q4ZJI4 515 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PLEKHG4Q58EX7 1191 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PPM1JQ5JR12 505 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 KIAA0930Q6ICG6 404 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 TCEAL6Q6IPX3 200 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 RALGPS2Q86X27 583 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 OR10A6Q8NH74 314 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 HCAR2Q8TDS4 363 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 IL12RB2Q99665 862 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF304Q9HCX3 659 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 ABCB8Q9NUT2 735 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 ETAA1Q9NY74 926 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 MARK1Q9P0L2 795 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 DNAJB4Q9UDY4 337 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PFDN2Q9UHV9 154 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PCDHGB1Q9Y5G3 927 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 A0A1W2PRG6 482 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 FAM234BA2RU67 622 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 GABRDO14764 452 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF3P17036 446 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 KHKP50053 298 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 ADAM8P78325 824 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 RPL19P84098 196 aaKnown RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 TYSND1Q2T9J0 566 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF572Q7Z3I7 529 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 LRRC57Q8N9N7 239 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 KBTBD7Q8WVZ9 684 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 KLHL32Q96NJ5 620 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 LENG8Q96PV6 779 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 FCRL5Q96RD9 977 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 TTYH3Q9C0H2 523 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 CDC14AQ9UNH5 594 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF879B4DU55 563 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 C8AP07357 584 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 ERVK-8P63133 956 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PUS10Q3MIT2 529 aaKnown RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 ZDHHC21Q8IVQ6 265 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 FSTL5Q8N475 847 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 LIX1Q8N485 282 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 HDDC3Q8N4P3 179 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 NDRG1Q92597 394 aaKnown RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 DTLQ9NZJ0 730 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 MYBPHLA2RUH7 354 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 RGS20O76081 388 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF823P16415 610 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PRPS1L1P21108 318 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 ASPAP45381 313 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 MAPK14Q16539 360 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 INAVAQ3KP66 663 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 FAM174BQ3ZCQ3 159 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 C5orf22Q49AR2 442 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 KCTD21Q4G0X4 260 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 SPRYD7Q5W111 196 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms