RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 SLC27A1Q6PCB7 646 aa4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 SPATA21Q7Z572 469 aa4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 GBGT1Q8N5D6 347 aa4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 RBMXL3Q8N7X1 1067 aaKnown RBP4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 DBF4BQ8NFT6 615 aa4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 NSMAFQ92636 917 aa4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 KRT35Q92764 455 aa4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 TANKQ92844 425 aa4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 SEMA4DQ92854 862 aa4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 DAZLQ92904 295 aaKnown RBP4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 MIB2Q96AX9 1013 aa4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 PARK7Q99497 189 aaKnown RBP4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 CNIH4Q9P003 139 aa4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 SEPT10Q9P0V9 454 aa4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 PTGFRNQ9P2B2 879 aa4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 CPSF3Q9UKF6 684 aaKnown RBP4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 SNX7Q9UNH6 387 aa4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 OR2W1Q9Y3N9 320 aa4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 YIPF1Q9Y548 306 aa4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB1P10-201ENST00000395823 TEX13DA0A0J9YY54 714 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 ZCWPW2A0A1B0GU75 182 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 CLEC18AA5D8T8 446 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 LILRA5A6NI73 299 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 ZNF587BE7ETH6 402 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 ST8SIA3O43173 380 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 GPR137BO60478 399 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 SELENOFO60613 162 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 KINO60870 393 aaKnown RBP4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 KCNJ13O60928 360 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 BMP10O95393 424 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 WDPCPO95876 746 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 ZNF12P17014 697 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 LBPP18428 481 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 PSMA3P25788 255 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 TMPOP42166 694 aaKnown RBP4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 ABCG1P45844 678 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 SLC9A3P48764 834 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 MMP15P51511 669 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 MAPK12P53778 367 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 UBXN1Q04323 297 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 SLC20A2Q08357 652 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 ZNF234Q14588 700 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 UGCGQ16739 394 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 SMU1Q2TAY7 513 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 ODF2Q5BJF6 829 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 EFHC1Q5JVL4 640 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 MFSD12Q6NUT3 480 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 PIM3Q86V86 326 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 FJX1Q86VR8 437 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 TMEM219Q86XT9 240 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 CREBRFQ8IUR6 639 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 PELI3Q8N2H9 469 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 UXS1Q8NBZ7 420 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 CLEC18CQ8NCF0 446 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 PPP4R1Q8TF05 950 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 FAM216AQ8WUB2 273 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 RAD54LQ92698 747 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 SYN2Q92777 582 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 PHF21AQ96BD5 680 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 MOB3AQ96BX8 217 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 HES6Q96HZ4 224 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 BTBD10Q9BSF8 475 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 CSTL1Q9H114 145 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 LRMDAQ9H2I8 198 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 FN3KQ9H479 309 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 DNAJC4Q9NNZ3 241 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 ABCB8Q9NUT2 735 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 ZNF224Q9NZL3 707 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 TBC1D7Q9P0N9 293 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 SIX4Q9UIU6 781 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 KCNS2Q9ULS6 477 aa4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 SPIN1Q9Y657 262 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P10-201ENST00000395823 HEG1Q9ULI3 1381 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 NEMP2A6NFY4 417 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 OOEPA6NGQ2 149 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 WDR1O75083 606 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 LDLRP01130 860 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 IGHV2-70P01814 119 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 VIMP08670 466 aaKnown RBP4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 PLA2G4BP0C869 781 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 HLA-DOBP13765 273 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 ACAT1P24752 427 aaKnown RBP4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 CD38P28907 300 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 WNT5AP41221 380 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 INHBEP58166 350 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 ACTN3Q08043 901 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 MYBPHQ13203 477 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 SLC39A14Q15043 492 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 PKN2Q16513 984 aaKnown RBP4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 TCTE1Q5JU00 501 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 RHBDF2Q6PJF5 856 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 ASB18Q6ZVZ8 466 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 NUP54Q7Z3B4 507 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 SATL1Q86VE3 508 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 ZSCAN30Q86W11 494 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 KRTAP1-3Q8IUG1 177 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 KLHL7Q8IXQ5 586 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 RNF113BQ8IZP6 322 aaKnown RBP4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 CLIP4Q8N3C7 705 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms