RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 BTN3A1O00481 513 aa20.49■□□□□ 0.87
TRAF4-203ENST00000394925 ZNF749O43361 778 aa20.49■□□□□ 0.87
TRAF4-203ENST00000394925 SRP72O76094 671 aaKnown RBP20.49■□□□□ 0.87
TRAF4-203ENST00000394925 CBX6O95503 412 aa20.49■□□□□ 0.87
TRAF4-203ENST00000394925 AGTP01019 485 aa20.49■□□□□ 0.87
TRAF4-203ENST00000394925 LDLRP01130 860 aa20.49■□□□□ 0.87
TRAF4-203ENST00000394925 PYGMP11217 842 aa20.49■□□□□ 0.87
TRAF4-203ENST00000394925 VWA5B1Q5TIE3 1220 aa20.49■□□□□ 0.87
TRAF4-203ENST00000394925 RHOT2Q8IXI1 618 aa20.49■□□□□ 0.87
TRAF4-203ENST00000394925 DCUN1D1Q96GG9 259 aa20.49■□□□□ 0.87
TRAF4-203ENST00000394925 FKBPLQ9UIM3 349 aa20.49■□□□□ 0.87
TRAF4-203ENST00000394925 PADI2Q9Y2J8 665 aa20.49■□□□□ 0.87
TRAF4-203ENST00000394925 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.49■□□□□ 0.875e-8■■■■□ 23.6
TRAF4-203ENST00000394925 FER1L5A0AVI2 2057 aa20.49■□□□□ 0.87
TRAF4-203ENST00000394925 MDC1Q14676 2089 aaKnown RBP20.49■□□□□ 0.87
TRAF4-203ENST00000394925 CCDC66A2RUB6 948 aa20.48■□□□□ 0.87
TRAF4-203ENST00000394925 C2orf81A6NN90 581 aa20.48■□□□□ 0.87
TRAF4-203ENST00000394925 MSL3P1P0C860 447 aa20.48■□□□□ 0.87
TRAF4-203ENST00000394925 ATXN8OSP0DMR3 200 aa20.48■□□□□ 0.87
TRAF4-203ENST00000394925 PVRP15151 417 aa20.48■□□□□ 0.87
TRAF4-203ENST00000394925 AGXTP21549 392 aa20.48■□□□□ 0.87
TRAF4-203ENST00000394925 HM13Q8TCT9 377 aa20.48■□□□□ 0.87
TRAF4-203ENST00000394925 P3H4Q92791 437 aa20.48■□□□□ 0.87
TRAF4-203ENST00000394925 HAUS1Q96CS2 278 aa20.48■□□□□ 0.87
TRAF4-203ENST00000394925 TRAPPC9Q96Q05 1148 aa20.48■□□□□ 0.87
TRAF4-203ENST00000394925 VAT1Q99536 393 aa20.48■□□□□ 0.87
TRAF4-203ENST00000394925 DPH2Q9BQC3 489 aaPredicted RBP20.48■□□□□ 0.87
TRAF4-203ENST00000394925 FICDQ9BVA6 458 aa20.48■□□□□ 0.87
TRAF4-203ENST00000394925 RSPH14Q9UHP6 348 aa20.48■□□□□ 0.87
TRAF4-203ENST00000394925 GOLGA6L19H0YKK7 550 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 LDB2O43679 373 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 SPOPO43791 374 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 RALBP11234 206 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 COMTP21964 271 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 SLC1A1P43005 524 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 TAF1AQ15573 450 aaPredicted RBP20.47■□□□□ 0.87
TRAF4-203ENST00000394925 TAZQ16635 292 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 MLIPQ5VWP3 458 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 SPOCD1Q6ZMY3 1216 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 CDHR3Q6ZTQ4 885 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 MRGPREQ86SM8 312 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 PHC3Q8NDX5 983 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 RBM41Q96IZ5 413 aaKnown RBP20.47■□□□□ 0.87
TRAF4-203ENST00000394925 DHRS4Q9BTZ2 278 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 PITPNM3Q9BZ71 974 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 SPTLC3Q9NUV7 552 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 CRLS1Q9UJA2 301 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 SLC5A6Q9Y289 635 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 B3GNT3Q9Y2A9 372 aa20.47■□□□□ 0.87
TRAF4-203ENST00000394925 ABCA12Q86UK0 2595 aa20.46■□□□□ 0.87
TRAF4-203ENST00000394925 TEP1Q99973 2627 aaKnown RBP20.46■□□□□ 0.87
TRAF4-203ENST00000394925 KLF7O75840 302 aaPredicted RBP20.46■□□□□ 0.87
TRAF4-203ENST00000394925 HBQ1P09105 142 aa20.46■□□□□ 0.87
TRAF4-203ENST00000394925 PRLHRP49683 370 aa20.46■□□□□ 0.87
TRAF4-203ENST00000394925 XIAPP98170 497 aa20.46■□□□□ 0.87
TRAF4-203ENST00000394925 LYPLAL1Q5VWZ2 237 aa20.46■□□□□ 0.87
TRAF4-203ENST00000394925 ZNF385CQ66K41 422 aaPredicted RBP20.46■□□□□ 0.87
TRAF4-203ENST00000394925 OR8K1Q8NGG5 319 aa20.46■□□□□ 0.87
TRAF4-203ENST00000394925 OR52E1Q8NGJ3 308 aa20.46■□□□□ 0.87
TRAF4-203ENST00000394925 FER1L6-AS2Q96M78 137 aa20.46■□□□□ 0.87
TRAF4-203ENST00000394925 C5orf34Q96MH7 638 aa20.46■□□□□ 0.87
TRAF4-203ENST00000394925 QKIQ96PU8 341 aaKnown RBP eCLIP20.46■□□□□ 0.87
TRAF4-203ENST00000394925 RANBP9Q96S59 729 aa20.46■□□□□ 0.87
TRAF4-203ENST00000394925 ANP32EQ9BTT0 268 aa20.46■□□□□ 0.87
TRAF4-203ENST00000394925 ILKAPQ9H0C8 392 aaPredicted RBP20.46■□□□□ 0.87
TRAF4-203ENST00000394925 FAM96AQ9H5X1 160 aa20.46■□□□□ 0.87
TRAF4-203ENST00000394925 XKR8Q9H6D3 395 aa20.46■□□□□ 0.87
TRAF4-203ENST00000394925 TRHDEQ9UKU6 1024 aa20.46■□□□□ 0.87
TRAF4-203ENST00000394925 ANKUB1A6NFN9 424 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 IFRD1O00458 451 aaPredicted RBP20.45■□□□□ 0.86
TRAF4-203ENST00000394925 CBSLP0DN79 551 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 CBSP35520 551 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 HADHAP40939 763 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 GEMP55040 296 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 TMPRSS15P98073 1019 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 PRKG2Q13237 762 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 OLIG2Q13516 323 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 SSPNQ14714 243 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 MYBPC3Q14896 1274 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 ZRANB3Q5FWF4 1079 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 C1orf189Q5VU69 101 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 GPR135Q8IZ08 494 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 GALNT16Q8N428 558 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 CLEC1AQ8NC01 280 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 N4BP2L2Q92802 583 aaPredicted RBP20.45■□□□□ 0.86
TRAF4-203ENST00000394925 IP6K3Q96PC2 410 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 DNAJC7Q99615 494 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 CHP1Q99653 195 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 APOL2Q9BQE5 337 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 TFB2MQ9H5Q4 396 aaKnown RBP20.45■□□□□ 0.86
TRAF4-203ENST00000394925 COG4Q9H9E3 785 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 ZNHIT6Q9NWK9 470 aaKnown RBP20.45■□□□□ 0.86
TRAF4-203ENST00000394925 ACTR10Q9NZ32 417 aa20.45■□□□□ 0.86
TRAF4-203ENST00000394925 GPN3Q9UHW5 284 aaPredicted RBP20.45■□□□□ 0.86
TRAF4-203ENST00000394925 PTRH2Q9Y3E5 179 aaKnown RBP20.45■□□□□ 0.86
TRAF4-203ENST00000394925 DIDO1Q9BTC0 2240 aaKnown RBP20.45■□□□□ 0.86
TRAF4-203ENST00000394925 SYCE3A1L190 88 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 C5orf60A6NFR6 353 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 AGAP14A8MT82 685 aa20.44■□□□□ 0.86
TRAF4-203ENST00000394925 C2orf74A8MZ97 194 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms