RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 SELENBP1Q13228 472 aa15.28■□□□□ 0.04
PTBP1-204ENST00000394601 PTPRNQ16849 979 aa15.28■□□□□ 0.04
PTBP1-204ENST00000394601 LRRC8DQ7L1W4 858 aa15.28■□□□□ 0.04
PTBP1-204ENST00000394601 PTRH1Q86Y79 214 aaKnown RBP15.28■□□□□ 0.04
PTBP1-204ENST00000394601 TNIP2Q8NFZ5 429 aa15.28■□□□□ 0.04
PTBP1-204ENST00000394601 KIAA1522Q9P206 1035 aaPredicted RBP15.28■□□□□ 0.04
PTBP1-204ENST00000394601 RAI2Q9Y5P3 530 aa15.28■□□□□ 0.04
PTBP1-204ENST00000394601 SYCE1LA8MT33 242 aa15.27■□□□□ 0.04
PTBP1-204ENST00000394601 ACOX3O15254 700 aa15.27■□□□□ 0.04
PTBP1-204ENST00000394601 SEC24AO95486 1093 aa15.27■□□□□ 0.04
PTBP1-204ENST00000394601 PSMA4P25789 261 aaKnown RBP15.27■□□□□ 0.04
PTBP1-204ENST00000394601 RACK1P63244 317 aaKnown RBP15.27■□□□□ 0.04
PTBP1-204ENST00000394601 Q6ZSR9 355 aa15.27■□□□□ 0.04
PTBP1-204ENST00000394601 PAGE2Q7Z2X7 111 aa15.27■□□□□ 0.04
PTBP1-204ENST00000394601 SYTL1Q8IYJ3 562 aa15.27■□□□□ 0.04
PTBP1-204ENST00000394601 ADGRG5Q8IZF4 528 aa15.27■□□□□ 0.04
PTBP1-204ENST00000394601 ESAMQ96AP7 390 aa15.27■□□□□ 0.04
PTBP1-204ENST00000394601 CSF3RQ99062 836 aa15.27■□□□□ 0.04
PTBP1-204ENST00000394601 MTRRQ9UBK8 725 aa15.27■□□□□ 0.04
PTBP1-204ENST00000394601 AGO1Q9UL18 857 aaKnown RBP15.27■□□□□ 0.04
PTBP1-204ENST00000394601 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.27■□□□□ 0.03
PTBP1-204ENST00000394601 A0A1W2PP18 115 aa15.27■□□□□ 0.03
PTBP1-204ENST00000394601 GFRA2O00451 464 aa15.27■□□□□ 0.03
PTBP1-204ENST00000394601 GAPDHSO14556 408 aaPredicted RBP15.27■□□□□ 0.03
PTBP1-204ENST00000394601 NOBOXO60393 691 aa15.27■□□□□ 0.03
PTBP1-204ENST00000394601 GREM1O60565 184 aa15.27■□□□□ 0.03
PTBP1-204ENST00000394601 CLDN11O75508 207 aa15.27■□□□□ 0.03
PTBP1-204ENST00000394601 FSHRP23945 695 aa15.27■□□□□ 0.03
PTBP1-204ENST00000394601 CMTR2Q8IYT2 770 aaKnown RBP15.27■□□□□ 0.03
PTBP1-204ENST00000394601 FBXO22Q8NEZ5 403 aa15.27■□□□□ 0.03
PTBP1-204ENST00000394601 VPS33AQ96AX1 596 aa15.27■□□□□ 0.03
PTBP1-204ENST00000394601 TUBGCP3Q96CW5 907 aa15.27■□□□□ 0.03
PTBP1-204ENST00000394601 ACOX2Q99424 681 aa15.27■□□□□ 0.03
PTBP1-204ENST00000394601 ACTL8Q9H568 366 aa15.27■□□□□ 0.03
PTBP1-204ENST00000394601 NANOGQ9H9S0 305 aa15.27■□□□□ 0.03
PTBP1-204ENST00000394601 LHX3Q9UBR4 397 aa15.27■□□□□ 0.03
PTBP1-204ENST00000394601 AQP12BA6NM10 295 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 EEDO75530 441 aaKnown RBP15.26■□□□□ 0.03
PTBP1-204ENST00000394601 CYBBP04839 570 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 MC4RP32245 332 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 CLCN4P51793 760 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 UFM1P61960 85 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 RAD51Q06609 339 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 NCEH1Q6PIU2 408 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 SPATC1Q76KD6 591 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 CHST9Q7L1S5 443 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 AQP12AQ8IXF9 295 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 TSPEARQ8WU66 669 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 TTPALQ9BTX7 342 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 ACTR3BQ9P1U1 418 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 STOML2Q9UJZ1 356 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 OR51B4Q9Y5P0 310 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 U3KQV3 271 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 TRIM64A6NGJ6 449 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 BTN3A1O00481 513 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 PKMP14618 531 aaKnown RBP15.26■□□□□ 0.03
PTBP1-204ENST00000394601 RPL17P18621 184 aaKnown RBP15.26■□□□□ 0.03
PTBP1-204ENST00000394601 STX1BP61266 288 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 FOXM1Q08050 763 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 GRIK2Q13002 908 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 ATAD3BQ5T9A4 648 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 ANKS6Q68DC2 871 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 DHRS4L2Q6PKH6 230 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 SCIMPQ6UWF3 145 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 RAB44Q7Z6P3 723 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-204ENST00000394601 AKAP14Q86UN6 197 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 OR52B6Q8NGF0 335 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 TRUB1Q8WWH5 349 aaKnown RBP15.26■□□□□ 0.03
PTBP1-204ENST00000394601 FIG4Q92562 907 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 RMDN1Q96DB5 314 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 MYRFLQ96LU7 910 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 PRRG3Q9BZD7 231 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 C6orf62Q9GZU0 229 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-204ENST00000394601 BPIFA1Q9NP55 256 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 HMG20AQ9NP66 347 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 SCUBE2Q9NQ36 999 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 RIC8BQ9NVN3 520 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 BAG5Q9UL15 447 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 NCF1BA6NI72 391 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-204ENST00000394601 NCF1CA8MVU1 366 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-204ENST00000394601 NCF1P14598 390 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-204ENST00000394601 LPOP22079 712 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-204ENST00000394601 ERVPABLB-1P60509 514 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 ZXDBP98169 803 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 RABL3Q5HYI8 236 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 ANKRD34AQ69YU3 496 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 ABI1Q8IZP0 508 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 MFSD2AQ8NA29 543 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 LPCAT1Q8NF37 534 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 PROKR1Q8TCW9 393 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 SH3YL1Q96HL8 342 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-204ENST00000394601 SPON2Q9BUD6 331 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 KLF16Q9BXK1 252 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-204ENST00000394601 NUSAP1Q9BXS6 441 aaKnown RBP15.26■□□□□ 0.03
PTBP1-204ENST00000394601 DNMT3BQ9UBC3 853 aaKnown RBP15.26■□□□□ 0.03
PTBP1-204ENST00000394601 ITGB1BP2Q9UKP3 347 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 ERVK-11Q9UQG0 969 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 PCDHB7Q9Y5E2 793 aa15.26■□□□□ 0.03
PTBP1-204ENST00000394601 IQCF5A8MTL0 148 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 ARPC2O15144 300 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms