RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 EPHB3P54753 998 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 TUBA4AP68366 448 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 CYP4F8P98187 520 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 FOXM1Q08050 763 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 TMED1Q13445 227 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 TBC1D25Q3MII6 688 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 AARS2Q5JTZ9 985 aaKnown RBP13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 RFLNAQ6ZTI6 216 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 STK32CQ86UX6 486 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 SERPINA9Q86WD7 417 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 MSRB3Q8IXL7 192 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 ADGRG2Q8IZP9 1017 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 PACRGLQ8N7B6 248 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 KCNJ9Q92806 393 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 PAWRQ96IZ0 340 aaKnown RBP13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 NSMCE2Q96MF7 247 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 LRRC3Q9BY71 257 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 CRISPLD2Q9H0B8 497 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 CLEC4EQ9ULY5 219 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 TDRKHQ9Y2W6 561 aaKnown RBP13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 ZNF711Q9Y462 761 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 TRIM64CA6NLI5 447 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 H3BMQ9 156 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 FFAR2O15552 330 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 MATN1P21941 496 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 EEFSECP57772 596 aaKnown RBP13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 ADARB1P78563 741 aaKnown RBP13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 ZBED5Q49AG3 693 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 COQ5Q5HYK3 327 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 SPANXN4Q5MJ08 99 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 ARMC12Q5T9G4 340 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 IRAK1BP1Q5VVH5 260 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 DUS1LQ6P1R4 473 aaKnown RBP13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 APCDD1Q8J025 514 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 DRAXINQ8NBI3 349 aaPredicted RBP13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 PAPD5Q8NDF8 572 aaKnown RBP13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 ADAMTS19Q8TE59 1207 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 ITCHQ96J02 903 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 COG8Q96MW5 612 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 YME1L1Q96TA2 773 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 MRPL17Q9NRX2 175 aaKnown RBP13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 SLC25A37Q9NYZ2 338 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 ZIM2Q9NZV7 527 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 AASSQ9UDR5 926 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 CCL27Q9Y4X3 112 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 CPQQ9Y646 472 aa13.24□□□□□ -0.29
GTF2F1-201ENST00000394456 DENND4CQ5VZ89 1909 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 ABHD14A-ACY1A0A1B0GW23 586 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 KANSL1LA0AUZ9 987 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 TRIM43BA6NCK2 446 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 UPK3BL1B0FP48 263 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 UPK3BL2E5RIL1 263 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 CLDN7O95471 211 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 PRAMEF1O95521 474 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 GSNP06396 782 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 ENO2P09104 434 aaPredicted RBP13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 GJA1P17302 382 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 HTR1EP28566 365 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 ADARP55265 1226 aaKnown RBP13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 RHOAP61586 193 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 KIAA0040Q15053 153 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 FAM174BQ3ZCQ3 159 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 PTRHD1Q6GMV3 140 aaKnown RBP13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 TXNDC11Q6PKC3 985 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 CHST9Q7L1S5 443 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 TSPAN33Q86UF1 283 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 TANKQ92844 425 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 TRIM43Q96BQ3 446 aaPredicted RBP13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 IFT80Q9P2H3 777 aaPredicted RBP13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 KLQ9UEF7 1012 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 VPS51Q9UID3 782 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 TRIM64A6NGJ6 449 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 NRG2O14511 850 aaPredicted RBP13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 AREL1O15033 823 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 SLC25A14O95258 325 aaPredicted RBP13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 LAG3P18627 525 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 PIGAP37287 484 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 CSKP41240 450 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 DCTN2Q13561 401 aaKnown RBP13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 LAPTM4AQ15012 233 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 LRRC73Q5JTD7 316 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 SUSD1Q6UWL2 747 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 ABRAXAS1Q6UWZ7 409 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 TMEM179BQ7Z7N9 219 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 PATL1Q86TB9 770 aaKnown RBP13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 DDX53Q86TM3 631 aaKnown RBP13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 ANKRD46Q86W74 232 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 TCEAL8Q8IYN2 117 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 TBC1D21Q8IYX1 336 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 RNF175Q8N4F7 328 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 DTNBP1Q96EV8 351 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 TNKS2Q9H2K2 1166 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 IL21Q9HBE4 155 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 HEBP1Q9NRV9 189 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 RIC8BQ9NVN3 520 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 DHRS7Q9Y394 339 aa13.23□□□□□ -0.29
GTF2F1-201ENST00000394456 PRMT5O14744 637 aaPredicted RBP13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 BNIP3LO60238 219 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 GABRR2P28476 465 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 BNIP3Q12983 259 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms