RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 CHID1Q9BWS9 393 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 ASB8Q9H765 288 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 TMEM39AQ9NV64 488 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 DUS2Q9NX74 493 aaKnown RBP13.47□□□□□ -0.25
CCDC142-202ENST00000393965 CFAP97Q9P2B7 532 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 KNL1Q8NG31 2342 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 A0A087WXM4 84 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 NPIPB15A6NHN6 443 aaPredicted RBP13.47□□□□□ -0.25
CCDC142-202ENST00000393965 KLK8O60259 260 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 ESRRBO95718 433 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 CKMP06732 381 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 BPIP17213 487 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 NR1D2Q14995 579 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 ABRAXAS2Q15018 415 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 PYCR3Q53H96 274 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 XKR7Q5GH72 579 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 IL27RAQ6UWB1 636 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 GOLGA7Q7Z5G4 137 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 CMTM8Q8IZV2 173 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 OR4F6Q8NGB9 312 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 EGFL8Q99944 293 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 WDR70Q9NW82 654 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 PKD2L2Q9NZM6 624 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 DNMT3BQ9UBC3 853 aaKnown RBP13.47□□□□□ -0.25
CCDC142-202ENST00000393965 CD84Q9UIB8 345 aa13.47□□□□□ -0.25
CCDC142-202ENST00000393965 LINC00854A0A1B0GVQ3 168 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 GFRA2O00451 464 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 LRATO95237 230 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 PRR35P0CG20 571 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 HMGCLP35914 325 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 CHRNA6Q15825 494 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 ASTLQ6HA08 431 aaPredicted RBP13.46□□□□□ -0.25
CCDC142-202ENST00000393965 SLC22A17Q8WUG5 538 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 BEGAINQ9BUH8 593 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 CFHR5Q9BXR6 569 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 RBM38Q9H0Z9 239 aaKnown RBP13.46□□□□□ -0.25
CCDC142-202ENST00000393965 ACTL8Q9H568 366 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 TBC1D23Q9NUY8 699 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 PKP3Q9Y446 797 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 HS6ST1O60243 411 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 SLC25A14O95258 325 aaPredicted RBP13.46□□□□□ -0.25
CCDC142-202ENST00000393965 B3GALT4O96024 378 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 LDLRP01130 860 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 ABCB1P08183 1280 aaPredicted RBP13.46□□□□□ -0.25
CCDC142-202ENST00000393965 CCR2P41597 374 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 RXRGP48443 463 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 ACADVLP49748 655 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 ATP6V0D1P61421 351 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 OCA2Q04671 838 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 SPIDRQ14159 915 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 CDKN3Q16667 212 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 MEP1AQ16819 746 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 RFTN2Q52LD8 501 aaPredicted RBP13.46□□□□□ -0.25
CCDC142-202ENST00000393965 C6orf136Q5SQH8 315 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 GPRIN3Q6ZVF9 776 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 NKAPQ8N5F7 415 aaKnown RBP13.46□□□□□ -0.25
CCDC142-202ENST00000393965 ARL10Q8N8L6 244 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 GPR26Q8NDV2 337 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 PROKR1Q8TCW9 393 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 OVCA2Q8WZ82 227 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 SLC30A1Q9Y6M5 507 aa13.46□□□□□ -0.25
CCDC142-202ENST00000393965 AXIN1O15169 862 aa13.46□□□□□ -0.26
CCDC142-202ENST00000393965 G6PDP11413 515 aa13.46□□□□□ -0.26
CCDC142-202ENST00000393965 PSMA3P25788 255 aa13.46□□□□□ -0.26
CCDC142-202ENST00000393965 RAD23AP54725 363 aa13.46□□□□□ -0.26
CCDC142-202ENST00000393965 HMGCS1Q01581 520 aa13.46□□□□□ -0.26
CCDC142-202ENST00000393965 SIM2Q14190 667 aaPredicted RBP13.46□□□□□ -0.26
CCDC142-202ENST00000393965 ATP6AP1LQ52LC2 224 aa13.46□□□□□ -0.26
CCDC142-202ENST00000393965 EGFLAMQ63HQ2 1017 aa13.46□□□□□ -0.26
CCDC142-202ENST00000393965 PHACTR4Q8IZ21 702 aa13.46□□□□□ -0.26
CCDC142-202ENST00000393965 KCNJ9Q92806 393 aa13.46□□□□□ -0.26
CCDC142-202ENST00000393965 ZFYVE1Q9HBF4 777 aa13.46□□□□□ -0.26
CCDC142-202ENST00000393965 AMBNQ9NP70 447 aa13.46□□□□□ -0.26
CCDC142-202ENST00000393965 PAK6Q9NQU5 681 aaPredicted RBP13.46□□□□□ -0.26
CCDC142-202ENST00000393965 ITM2CQ9NQX7 267 aa13.46□□□□□ -0.26
CCDC142-202ENST00000393965 AIG1Q9NVV5 245 aa13.46□□□□□ -0.26
CCDC142-202ENST00000393965 NOTCH4Q99466 2003 aa13.46□□□□□ -0.26
CCDC142-202ENST00000393965 TGM5O43548 720 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 MTX2O75431 263 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 SLC2A4P14672 509 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 CSF2RAP15509 400 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 FSHRP23945 695 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 DGKEP52429 567 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 ZXDCQ2QGD7 858 aaPredicted RBP13.45□□□□□ -0.26
CCDC142-202ENST00000393965 PTRHD1Q6GMV3 140 aaKnown RBP13.45□□□□□ -0.26
CCDC142-202ENST00000393965 FRA10AC1Q70Z53 315 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 DET1Q7L5Y6 550 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 SPRED2Q7Z698 418 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 REM2Q8IYK8 340 aaPredicted RBP13.45□□□□□ -0.26
CCDC142-202ENST00000393965 FAM86B1Q8N7N1 296 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 METTL6Q8TCB7 284 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 TMEM125Q96AQ2 219 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 TRMT2BQ96GJ1 504 aaKnown RBP13.45□□□□□ -0.26
CCDC142-202ENST00000393965 STOML2Q9UJZ1 356 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 PCDHA9Q9Y5H5 950 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 XPNPEP2O43895 674 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 GNRH1P01148 92 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 RPS9P46781 194 aaKnown RBP13.45□□□□□ -0.26
CCDC142-202ENST00000393965 CBX3Q13185 183 aa13.45□□□□□ -0.26
CCDC142-202ENST00000393965 VEPH1Q14D04 833 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms