RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 ERVPABLB-1P60509 514 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 ZXDBP98169 803 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 ABRAXAS2Q15018 415 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 ZNF598Q86UK7 904 aaKnown RBP16.09■□□□□ 0.17
PHTF1-205ENST00000393357 RIOX2Q8IUF8 465 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 P3H2Q8IVL5 708 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 OR4K2Q8NGD2 314 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 SKA2Q8WVK7 121 aaPredicted RBP16.09■□□□□ 0.17
PHTF1-205ENST00000393357 NT5C3BQ969T7 300 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 LINGO1Q96FE5 620 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 KCNC2Q96PR1 638 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 NEDD4LQ96PU5 975 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 KATNAL1Q9BW62 490 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 UGT2B28Q9BY64 529 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 HOXD1Q9GZZ0 328 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 DNAJB9Q9UBS3 223 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 NRCAMQ92823 1304 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 PIRO00625 290 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 TSC22D2O75157 780 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 HSPA7P48741 367 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 EMX2Q04743 252 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 VARS2Q5ST30 1063 aaKnown RBP16.09■□□□□ 0.17
PHTF1-205ENST00000393357 TPRG1LQ5T0D9 272 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 Q6ZSR9 355 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 PROSER1Q86XN7 944 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 TTC30BQ8N4P2 665 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 RBM4BQ9BQ04 359 aaKnown RBP16.09■□□□□ 0.17
PHTF1-205ENST00000393357 TMEM246Q9BRR3 403 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 RBM4Q9BWF3 364 aaKnown RBP16.09■□□□□ 0.17
PHTF1-205ENST00000393357 RMND5AQ9H871 391 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 ABCG2Q9UNQ0 655 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 PKP3Q9Y446 797 aa16.09■□□□□ 0.17
PHTF1-205ENST00000393357 KRT87PA6NCN2 255 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 TRIM64A6NGJ6 449 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 CTDSP2O14595 271 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 CYP11A1P05108 521 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 UMPSP11172 480 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 CCNCP24863 283 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 TGM4P49221 684 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 MXD1Q05195 221 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 RUNDC3AQ59EK9 446 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 ZNF484Q5JVG2 852 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 MMAAQ8IVH4 418 aaKnown RBP16.08■□□□□ 0.17
PHTF1-205ENST00000393357 RIMKLAQ8IXN7 391 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 COLGALT2Q8IYK4 626 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 METTL4Q8N3J2 472 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 C3orf58Q8NDZ4 430 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 CEP295NLQ96MC4 621 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 CATSPERZQ9NTU4 200 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 GTF2IRD1Q9UHL9 959 aa16.08■□□□□ 0.17
PHTF1-205ENST00000393357 ELOVL7A1L3X0 281 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 GPR182O15218 404 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 RGS10O43665 173 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 TNFRSF1BP20333 461 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 EDNRBP24530 442 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 CASP3P42574 277 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 EEFSECP57772 596 aaKnown RBP16.08■□□□□ 0.16
PHTF1-205ENST00000393357 ARHGAP1Q07960 439 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 DMC1Q14565 340 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 DLEU7Q6UYE1 221 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 RASAL3Q86YV0 1011 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 CADM2Q8N3J6 435 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 OR52E6Q96RD3 313 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 DPH2Q9BQC3 489 aaPredicted RBP16.08■□□□□ 0.16
PHTF1-205ENST00000393357 EMILIN2Q9BXX0 1053 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 NUAK2Q9H093 628 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 CNGB3Q9NQW8 809 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 CDH9Q9ULB4 789 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 SPO11Q9Y5K1 396 aa16.08■□□□□ 0.16
PHTF1-205ENST00000393357 SLC22A1O15245 554 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 EEDO75530 441 aaKnown RBP16.07■□□□□ 0.16
PHTF1-205ENST00000393357 PCMT1P22061 227 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 ACVRL1P37023 503 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 PPP5CP53041 499 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 CD83Q01151 205 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 RAD51Q06609 339 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 EFEMP1Q12805 493 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 PON2Q15165 354 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 CCDC58Q4VC31 144 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 CARD16Q5EG05 197 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 MRNIPQ6NTE8 343 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 BEND5Q7L4P6 421 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 RHOXF1Q8NHV9 184 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 L3HYPDHQ96EM0 354 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 ATOH8Q96SQ7 321 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 CENPOQ9BU64 300 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 IFT52Q9Y366 437 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 IPPQ9Y573 584 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 N6AMT1Q9Y5N5 214 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 E9PAM4 449 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 NTRK1P04629 796 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 JUNBP17275 347 aaPredicted RBP16.07■□□□□ 0.16
PHTF1-205ENST00000393357 HTR1EP28566 365 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 ADRA1AP35348 466 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 OR2B6P58173 313 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 CPSF6Q16630 551 aaKnown RBP eCLIP16.07■□□□□ 0.16
PHTF1-205ENST00000393357 LYPD8Q6UX82 237 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 GPSM1Q86YR5 675 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 HIPK1Q86Z02 1210 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 ZDHHC21Q8IVQ6 265 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms