RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 KLHL29Q96CT2 875 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 SLC7A6OSQ96CW6 309 aaPredicted RBP17.12■□□□□ 0.33
MBD4-202ENST00000393278 C19orf60Q96EN9 201 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 HIST1H2AHQ96KK5 128 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 KCNA7Q96RP8 456 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 HIST1H2AJQ99878 128 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 H2AFJQ9BTM1 129 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 OSBPL6Q9BZF3 934 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 NOL11Q9H8H0 719 aaKnown RBP17.12■□□□□ 0.33
MBD4-202ENST00000393278 STK38LQ9Y2H1 464 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 TMEM98Q9Y2Y6 226 aa17.12■□□□□ 0.33
MBD4-202ENST00000393278 PABPN1LA6NDY0 278 aaKnown RBP17.11■□□□□ 0.33
MBD4-202ENST00000393278 LOC730098B7Z3J9 87 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 GIPC1O14908 333 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 CHUKO15111 745 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 CCNT2O60583 730 aaKnown RBP17.11■□□□□ 0.33
MBD4-202ENST00000393278 PSIP1O75475 530 aaKnown RBP17.11■□□□□ 0.33
MBD4-202ENST00000393278 ACADMP11310 421 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 GGT5P36269 586 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 MAPK9P45984 424 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 RASSF2P50749 326 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 AP1S2P56377 157 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 INPP5AQ14642 412 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 NXNQ6DKJ4 435 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 TTC23LQ6PF05 361 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 CRTC3Q6UUV7 619 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 XKR5Q6UX68 686 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 KIAA1324Q6UXG2 1013 aaKnown RBP17.11■□□□□ 0.33
MBD4-202ENST00000393278 TEX9Q8N6V9 391 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 OR52B6Q8NGF0 335 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 MCOLN3Q8TDD5 553 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 TWIST2Q8WVJ9 160 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 LGR4Q9BXB1 951 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 C1QTNF7Q9BXJ2 289 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 NUSAP1Q9BXS6 441 aaKnown RBP17.11■□□□□ 0.33
MBD4-202ENST00000393278 SLC17A9Q9BYT1 436 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 LRMDAQ9H2I8 198 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 ZNF385DQ9H6B1 395 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 WDR26Q9H7D7 661 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 OPTCQ9UBM4 332 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 NDRG2Q9UN36 371 aaKnown RBP17.11■□□□□ 0.33
MBD4-202ENST00000393278 DUSP12Q9UNI6 340 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 CAPN7Q9Y6W3 813 aa17.11■□□□□ 0.33
MBD4-202ENST00000393278 TBC1D3DA0A087WVF3 549 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 TBC1D3IA0A087WXS9 549 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 TBC1D3EA0A087X179 549 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 TBC1D3KA0A087X1G2 549 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 TCRBV21S2A2A0A5A6 115 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 TBC1D3FA6NER0 549 aaPredicted RBP17.1■□□□□ 0.33
MBD4-202ENST00000393278 CFAP73A6NFT4 308 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 TBC1D3LB9A6J9 549 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 K7EPI3 171 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 MYO1CO00159 1063 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 OR7A17O14581 309 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 DCXO43602 365 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 CRCPO75575 148 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 POP7O75817 140 aaKnown RBP17.1■□□□□ 0.33
MBD4-202ENST00000393278 ENO1P06733 434 aaKnown RBP17.1■□□□□ 0.33
MBD4-202ENST00000393278 TBC1D3HP0C7X1 549 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 ESRRAP11474 423 aaPredicted RBP17.1■□□□□ 0.33
MBD4-202ENST00000393278 IL9P15248 144 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 PDHA2P29803 388 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 HNMTP50135 292 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 ABRQ12979 859 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 TBC1D3GQ6DHY5 549 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 TBC1D3CQ6IPX1 549 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 DOK6Q6PKX4 331 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 C11orf96Q7Z7L8 435 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 CFAP206Q8IYR0 622 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 TBC1D3Q8IZP1 549 aaPredicted RBP17.1■□□□□ 0.33
MBD4-202ENST00000393278 OR2L2Q8NH16 312 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 HM13Q8TCT9 377 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 ARHGEF3Q9NR81 526 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 KLC4Q9NSK0 619 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 TAGLN3Q9UI15 199 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 MGAT4DA6NG13 374 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 ARHGEF33A8MVX0 844 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 GPR89AB7ZAQ6 455 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 H3BM21 787 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 PIP5K1BO14986 540 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 STK16O75716 305 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 OTCP00480 354 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 GPR89BP0CG08 455 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 UROSP10746 265 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 GDF5P43026 501 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 CCR3P51677 355 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 ERVPABLB-1P60509 514 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 PLOD1Q02809 727 aaPredicted RBP17.1■□□□□ 0.33
MBD4-202ENST00000393278 CDC16Q13042 620 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 PUS10Q3MIT2 529 aaKnown RBP17.1■□□□□ 0.33
MBD4-202ENST00000393278 TMEM198Q66K66 360 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 LETMD1Q6P1Q0 360 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 ZNF852Q6ZMS4 543 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 EFL1Q7Z2Z2 1120 aaKnown RBP17.1■□□□□ 0.33
MBD4-202ENST00000393278 CPSF7Q8N684 471 aaKnown RBP17.1■□□□□ 0.33
MBD4-202ENST00000393278 ASB12Q8WXK4 309 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 TUBB1Q9H4B7 451 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 IPPKQ9H8X2 491 aa17.1■□□□□ 0.33
MBD4-202ENST00000393278 PHPT1Q9NRX4 125 aaPredicted RBP17.1■□□□□ 0.33
MBD4-202ENST00000393278 OR1A2Q9Y585 309 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms