RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 FAM149B1Q96BN6 582 aa2.31□□□□□ -2.04
RNU6-1009P-201ENST00000390996 GAL3ST4Q96RP7 486 aa2.31□□□□□ -2.04
RNU6-1009P-201ENST00000390996 SDR39U1Q9NRG7 319 aaPredicted RBP2.31□□□□□ -2.04
RNU6-1009P-201ENST00000390996 GGA3Q9NZ52 723 aa2.31□□□□□ -2.04
RNU6-1009P-201ENST00000390996 DBNLQ9UJU6 430 aaKnown RBP2.31□□□□□ -2.04
RNU6-1009P-201ENST00000390996 COL4A4P53420 1690 aaPredicted RBP2.31□□□□□ -2.04
RNU6-1009P-201ENST00000390996 CROCCQ5TZA2 2017 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 MED19A0JLT2 244 aaPredicted RBP2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 ACOD1A6NK06 481 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 E9PI62 339 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 TMCC2O75069 709 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 IPO7O95373 1038 aaKnown RBP2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 PRB2P02812 416 aaPredicted RBP2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 POLBP06746 335 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 CA6P23280 308 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 IL4RP24394 825 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 MSH2P43246 934 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 HARS2P49590 506 aaKnown RBP2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 GPR143P51810 404 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 RARSP54136 660 aaKnown RBP2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 TAF13Q15543 124 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 CYP26C1Q6V0L0 522 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 ZNF354CQ86Y25 554 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 TMEM116Q8NCL8 245 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 RFT1Q96AA3 541 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 UBXN10Q96LJ8 280 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 ABHD6Q9BV23 337 aa2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 LAS1LQ9Y4W2 734 aaKnown RBP2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 SPIN1Q9Y657 262 aaPredicted RBP2.3□□□□□ -2.04
RNU6-1009P-201ENST00000390996 NPIPB15A6NHN6 443 aaPredicted RBP2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 HOXC11O43248 304 aaPredicted RBP2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 TMEM50BP56557 158 aa2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 ZFP36L1Q07352 338 aaKnown RBP2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 PNRC1Q12796 327 aaPredicted RBP2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 NAB2Q15742 525 aa2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 TAF12Q16514 161 aa2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 GCNT6Q5T4J0 391 aa2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 ADALQ6DHV7 355 aa2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 KIRREL3Q8IZU9 778 aa2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 CNTROBQ8N137 903 aa2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 OR10G8Q8NGN5 311 aa2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 SMAP2Q8WU79 429 aaPredicted RBP2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 HTRA1Q92743 480 aa2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 ARSGQ96EG1 525 aa2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 C1orf147Q96MC9 270 aaPredicted RBP2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 FNBP1Q96RU3 617 aa2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 POLR1BQ9H9Y6 1135 aa2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 SPHK2Q9NRA0 654 aa2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 ATRXP46100 2492 aa2.29□□□□□ -2.04
RNU6-1009P-201ENST00000390996 ELOVL7A1L3X0 281 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 SHISA7A6NL88 538 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 MAGEC1O60732 1142 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 DFFBO76075 338 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 HIST1H2ABP04908 130 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 HIST1H2ADP20671 130 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 PBX3P40426 434 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 RPL7AP62424 266 aaKnown RBP2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 CYCSP99999 105 aaKnown RBP2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 TFAP4Q01664 338 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 LRMPQ12912 555 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 GRTP1Q5TC63 336 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 BTN2A1Q7KYR7 527 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 HIST3H2AQ7L7L0 130 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 GALNT5Q7Z7M9 940 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 AQP11Q8NBQ7 271 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 HJURPQ8NCD3 748 aaPredicted RBP2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 LRRC15Q8TF66 581 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 ST8SIA4Q92187 359 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 SMARCE1Q969G3 411 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 PERPQ96FX8 193 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 VN1R1Q9GZP7 353 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 ARRDC1-AS1Q9H2J1 176 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 NPAP1Q9NZP6 1156 aa2.28□□□□□ -2.04
RNU6-1009P-201ENST00000390996 COL16A1Q07092 1604 aaPredicted RBP2.28□□□□□ -2.05
RNU6-1009P-201ENST00000390996 ABCA7Q8IZY2 2146 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 CCDC196A0A1B0GTZ2 297 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 OGG1O15527 345 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 NDUFS3O75489 264 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 HPRP00739 348 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 HOXD4P09016 255 aaPredicted RBP2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 PRKACGP22612 351 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 PIK3R1P27986 724 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 HALP42357 657 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 MTHFRP42898 656 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 RHBDL3P58872 404 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 CAPRIN1Q14444 709 aaKnown RBP2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 CYP20A1Q6UW02 462 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 KCNMB4Q86W47 210 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 TSPYL6Q8N831 410 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 NIPA2Q8N8Q9 360 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 ARHGAP45Q92619 1136 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 WDFY2Q96P53 400 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 HGH1Q9BTY7 390 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 KAT14Q9H8E8 782 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 ZNF701Q9NV72 531 aaPredicted RBP2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 ANAPC11Q9NYG5 84 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 TAS2R10Q9NYW0 307 aa2.27□□□□□ -2.05
RNU6-1009P-201ENST00000390996 OSGIN1Q9UJX0 560 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms