RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 A4GALTQ9NPC4 353 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 B3GAT2Q9NPZ5 323 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 SDR39U1Q9NRG7 319 aaPredicted RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 SERINC1Q9NRX5 453 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 RCC2Q9P258 522 aaKnown RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 ABCD2Q9UBJ2 740 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 UBA2Q9UBT2 640 aaPredicted RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 SLC25A10Q9UBX3 287 aaPredicted RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 CNOT8Q9UFF9 292 aaKnown RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 DBNLQ9UJU6 430 aaKnown RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 GJD2Q9UKL4 321 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 INTS6Q9UL03 887 aaKnown RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 GRID1Q9ULK0 1009 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 PLCL2Q9UPR0 1127 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 CAMK2AQ9UQM7 478 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 R3HDM2Q9Y2K5 976 aaKnown RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 RIPOR2Q9Y4F9 1068 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 CLIC4Q9Y696 253 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 CSNK1G3Q9Y6M4 447 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 MAU2Q9Y6X3 613 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 GON4LQ3T8J9 2241 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 RALGAPA1Q6GYQ0 2036 aa0.4□□□□□ -2.34
SNORD28-201ENST00000384706 LOC105371242A0A075B767 164 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 A0A1W2PR80 420 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 hCG_1642624A0A1W2PR95 340 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 KANSL1LA0AUZ9 987 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 MED19A0JLT2 244 aaPredicted RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 ELOVL7A1L3X0 281 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 E9PI62 339 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 CDX4O14627 284 aaPredicted RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 TSPAN4O14817 238 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 TFECO14948 347 aaPredicted RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 LDLRAD4O15165 306 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 DFFBO76075 338 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 PARNO95453 639 aaKnown RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 C9P02748 559 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 THY1P04216 161 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 IFIT1P09914 478 aaKnown RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 SELLP14151 372 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 CA4P22748 312 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 CA6P23280 308 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 PSMC2P35998 433 aaKnown RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 CPOXP36551 454 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 ETV5P41161 510 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 SOX3P41225 446 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 PAFAH1B1P43034 410 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 TSFMP43897 325 aaKnown RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 CTCFP49711 727 aaPredicted RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 F2RL1P55085 397 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 HERV-K104P61576 105 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 PPP2R2BQ00005 443 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 PRKCZQ05513 592 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 KHDRBS1Q07666 443 aaKnown RBP eCLIP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 DMPKQ09013 629 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 PLA2G7Q13093 441 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 OLIG2Q13516 323 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 CAMK1Q14012 370 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 EFR3AQ14156 821 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 FRG1Q14331 258 aaKnown RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 SQLEQ14534 574 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 MTF1Q14872 753 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 NAB2Q15742 525 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 MEP1AQ16819 746 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 LRIF1Q5T3J3 769 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 GCNT6Q5T4J0 391 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 FAM69AQ5T7M9 428 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 MAP3K21Q5TCX8 1036 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 C20orf194Q5TEA3 1177 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 CES4AQ5XG92 561 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 WSCD1Q658N2 575 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 OLFML2AQ68BL7 652 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 ADALQ6DHV7 355 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 ZCCHC12Q6PEW1 402 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 SLC25A47Q6Q0C1 308 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 TMEM207Q6UWW9 146 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 CCBE1Q6UXH8 406 aaPredicted RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 BAIAP2L2Q6UXY1 529 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 FRRS1Q6ZNA5 592 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 GDPGP1Q6ZNW5 385 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 TOGARAM2Q6ZUX3 1019 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 CHMP1BQ7LBR1 199 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 TSPAN33Q86UF1 283 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 IQCHQ86VS3 1027 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 FAM131BQ86XD5 332 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 CEP97Q8IW35 865 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 ZC3H3Q8IXZ2 948 aaKnown RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 ANKRD13AQ8IZ07 590 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 EID3Q8N140 333 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 ENAHQ8N8S7 591 aaPredicted RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 RTL3Q8N8U3 475 aaKnown RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 GOLGA6L2Q8N9W4 650 aaPredicted RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 GPRC5AQ8NFJ5 357 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 NPRL2Q8WTW4 380 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 BADQ92934 168 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 TBC1D20Q96BZ9 403 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 ZBTB10Q96DT7 871 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 CNRIP1Q96F85 164 aaPredicted RBP0.4□□□□□ -2.35
SNORD28-201ENST00000384706 PHYHIPLQ96FC7 376 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 APOPT1Q96IL0 206 aa0.4□□□□□ -2.35
SNORD28-201ENST00000384706 CCDC136Q96JN2 1154 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms