RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 H2AFJQ9BTM1 129 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 KCNK13Q9HB14 408 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 EML4Q9HC35 981 aaKnown RBP26.22■■□□□ 1.79
MSX1-201ENST00000382723 FGF22Q9HCT0 170 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 WWOXQ9NZC7 414 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 GPSM3Q9Y4H4 160 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 DNMT3AQ9Y6K1 912 aaPredicted RBP26.22■■□□□ 1.79
MSX1-201ENST00000382723 PRAMEF26H0Y7S4 382 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 TAPBPO15533 448 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 PI15O43692 258 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 NDUFS2O75306 463 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 RPS17P08708 135 aaKnown RBP26.22■■□□□ 1.79
MSX1-201ENST00000382723 HOXC4P09017 264 aaPredicted RBP26.22■■□□□ 1.79
MSX1-201ENST00000382723 PFN3P60673 137 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 NFATC4Q14934 902 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 ZSCAN26Q16670 478 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 TPRG1LQ5T0D9 272 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 OXR1Q8N573 874 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 TMEM145Q8NBT3 493 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 MCOLN3Q8TDD5 553 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 TRPC4APQ8TEL6 797 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 RHBDF1Q96CC6 855 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 TMEM120AQ9BXJ8 343 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 RMI1Q9H9A7 625 aa26.22■■□□□ 1.79
MSX1-201ENST00000382723 SEMA4BQ9NPR2 832 aaPredicted RBP26.22■■□□□ 1.79
MSX1-201ENST00000382723 PTBP2Q9UKA9 531 aaKnown RBP26.22■■□□□ 1.79
MSX1-201ENST00000382723 PPP6CO00743 305 aa26.21■■□□□ 1.79
MSX1-201ENST00000382723 UBFD1O14562 309 aaKnown RBP26.21■■□□□ 1.79
MSX1-201ENST00000382723 PSIP1O75475 530 aaKnown RBP26.21■■□□□ 1.79
MSX1-201ENST00000382723 GNPDA1P46926 289 aa26.21■■□□□ 1.79
MSX1-201ENST00000382723 HSPA7P48741 367 aa26.21■■□□□ 1.79
MSX1-201ENST00000382723 RPL14P50914 215 aaKnown RBP26.21■■□□□ 1.79
MSX1-201ENST00000382723 ARFIP2P53365 341 aa26.21■■□□□ 1.79
MSX1-201ENST00000382723 PLOD1Q02809 727 aaPredicted RBP26.21■■□□□ 1.79
MSX1-201ENST00000382723 SH2D4BQ5SQS7 431 aa26.21■■□□□ 1.79
MSX1-201ENST00000382723 SULT1C3Q6IMI6 304 aa26.21■■□□□ 1.79
MSX1-201ENST00000382723 CUZD1Q86UP6 607 aa26.21■■□□□ 1.79
MSX1-201ENST00000382723 OR56A4Q8NGH8 313 aa26.21■■□□□ 1.79
MSX1-201ENST00000382723 TRMOQ9BU70 441 aa26.21■■□□□ 1.79
MSX1-201ENST00000382723 KLC4Q9NSK0 619 aa26.21■■□□□ 1.79
MSX1-201ENST00000382723 PCTPQ9UKL6 214 aa26.21■■□□□ 1.79
MSX1-201ENST00000382723 ZBTB32Q9Y2Y4 487 aaPredicted RBP26.21■■□□□ 1.79
MSX1-201ENST00000382723 HS3ST3A1Q9Y663 406 aa26.21■■□□□ 1.79
MSX1-201ENST00000382723 USH1CQ9Y6N9 552 aa26.21■■□□□ 1.79
MSX1-201ENST00000382723 ARHGEF33A8MVX0 844 aa26.2■■□□□ 1.79
MSX1-201ENST00000382723 ANXA5P08758 320 aa26.2■■□□□ 1.79
MSX1-201ENST00000382723 MAP4P27816 1152 aaKnown RBP26.2■■□□□ 1.79
MSX1-201ENST00000382723 BDKRB1P46663 353 aa26.2■■□□□ 1.79
MSX1-201ENST00000382723 CLCQ05315 142 aa26.2■■□□□ 1.79
MSX1-201ENST00000382723 CWF19L1Q69YN2 538 aaKnown RBP26.2■■□□□ 1.79
MSX1-201ENST00000382723 SPDYE1Q8NFV5 336 aaPredicted RBP26.2■■□□□ 1.79
MSX1-201ENST00000382723 CIDEBQ9UHD4 219 aa26.2■■□□□ 1.79
MSX1-201ENST00000382723 PSMD13Q9UNM6 376 aa26.2■■□□□ 1.79
MSX1-201ENST00000382723 PLEKHM1Q9Y4G2 1056 aa26.2■■□□□ 1.79
MSX1-201ENST00000382723 TNPO3Q9Y5L0 923 aaKnown RBP26.2■■□□□ 1.79
MSX1-201ENST00000382723 PRSS38A1L453 326 aa26.2■■□□□ 1.78
MSX1-201ENST00000382723 TMEM233B4DJY2 109 aa26.2■■□□□ 1.78
MSX1-201ENST00000382723 HTR1BP28222 390 aa26.2■■□□□ 1.78
MSX1-201ENST00000382723 THOP1P52888 689 aa26.2■■□□□ 1.78
MSX1-201ENST00000382723 SIGLEC14Q08ET2 396 aa26.2■■□□□ 1.78
MSX1-201ENST00000382723 PYCR3Q53H96 274 aa26.2■■□□□ 1.78
MSX1-201ENST00000382723 Q6ZSR6 202 aa26.2■■□□□ 1.78
MSX1-201ENST00000382723 ZNF483Q8TF39 744 aaPredicted RBP26.2■■□□□ 1.78
MSX1-201ENST00000382723 RMDN2Q96LZ7 410 aa26.2■■□□□ 1.78
MSX1-201ENST00000382723 WDR92Q96MX6 357 aa26.2■■□□□ 1.78
MSX1-201ENST00000382723 TMEM79Q9BSE2 394 aa26.2■■□□□ 1.78
MSX1-201ENST00000382723 C1QTNF3Q9BXJ4 246 aa26.2■■□□□ 1.78
MSX1-201ENST00000382723 DPEP2Q9H4A9 486 aa26.2■■□□□ 1.78
MSX1-201ENST00000382723 OSGEPL1Q9H4B0 414 aa26.2■■□□□ 1.78
MSX1-201ENST00000382723 CARS2Q9HA77 564 aaKnown RBP26.2■■□□□ 1.78
MSX1-201ENST00000382723 TNFRSF12AQ9NP84 129 aa26.2■■□□□ 1.78
MSX1-201ENST00000382723 FIS1Q9Y3D6 152 aa26.2■■□□□ 1.78
MSX1-201ENST00000382723 K7ESF4 209 aa26.19■■□□□ 1.78
MSX1-201ENST00000382723 EBAG9O00559 213 aa26.19■■□□□ 1.78
MSX1-201ENST00000382723 HGSO14964 777 aaPredicted RBP26.19■■□□□ 1.78
MSX1-201ENST00000382723 CATP04040 527 aaKnown RBP26.19■■□□□ 1.78
MSX1-201ENST00000382723 KELP23276 732 aa26.19■■□□□ 1.78
MSX1-201ENST00000382723 GDF5P43026 501 aa26.19■■□□□ 1.78
MSX1-201ENST00000382723 DMTNQ08495 405 aa26.19■■□□□ 1.78
MSX1-201ENST00000382723 EEF1AKMT2Q5JPI9 291 aaKnown RBP26.19■■□□□ 1.78
MSX1-201ENST00000382723 RASGRP3Q8IV61 690 aa26.19■■□□□ 1.78
MSX1-201ENST00000382723 OR13H1Q8NG92 308 aa26.19■■□□□ 1.78
MSX1-201ENST00000382723 OR52A5Q9H2C5 316 aa26.19■■□□□ 1.78
MSX1-201ENST00000382723 HAO1Q9UJM8 370 aa26.19■■□□□ 1.78
MSX1-201ENST00000382723 DMTF1Q9Y222 760 aa26.19■■□□□ 1.78
MSX1-201ENST00000382723 KCNK6Q9Y257 313 aa26.19■■□□□ 1.78
MSX1-201ENST00000382723 EPB41L3Q9Y2J2 1087 aaPredicted RBP26.19■■□□□ 1.78
MSX1-201ENST00000382723 E2F3O00716 465 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 CCNT2O60583 730 aaKnown RBP26.18■■□□□ 1.78
MSX1-201ENST00000382723 SNUPNO95149 360 aaKnown RBP26.18■■□□□ 1.78
MSX1-201ENST00000382723 CCR3P51677 355 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 PCBP2Q15366 365 aaKnown RBP eCLIP26.18■■□□□ 1.78
MSX1-201ENST00000382723 CCSMST1Q4G0I0 132 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 METRNLQ641Q3 311 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 RD3Q7Z3Z2 195 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 MAVSQ7Z434 540 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 OR1E3Q8WZA6 343 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 PDXPQ96GD0 296 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 HGH1Q9BTY7 390 aa26.18■■□□□ 1.78
MSX1-201ENST00000382723 KCNK4Q9NYG8 393 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms