RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 RIMS3Q9UJD0 308 aa10.28□□□□□ -0.76
POLR2J3-201ENST00000379340 FBXO10Q9UK96 956 aa10.28□□□□□ -0.76
POLR2J3-201ENST00000379340 PACSIN3Q9UKS6 424 aa10.28□□□□□ -0.76
POLR2J3-201ENST00000379340 CNOT11Q9UKZ1 510 aaKnown RBP10.28□□□□□ -0.76
POLR2J3-201ENST00000379340 ASB1Q9Y576 335 aa10.28□□□□□ -0.76
POLR2J3-201ENST00000379340 NOTCH4Q99466 2003 aa10.28□□□□□ -0.76
POLR2J3-201ENST00000379340 TRIOO75962 3097 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 CACNA1HO95180 2353 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 C19orf67A6NJJ6 358 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 AQP12BA6NM10 295 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 RGS14O43566 566 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 SMNDC1O75940 238 aaKnown RBP eCLIP10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 CAPNS1P04632 268 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 ATP1B2P14415 290 aaPredicted RBP10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 EPCAMP16422 314 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 EPB42P16452 691 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 AOAHP28039 575 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 IRS1P35568 1242 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 GGT5P36269 586 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 ARL1P40616 181 aaPredicted RBP10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 HSPA7P48741 367 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 CLCN2P51788 898 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 POLR2JP52435 117 aaKnown RBP10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 SLC7A2P52569 658 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 VPS26BQ4G0F5 336 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 FBXO48Q5FWF7 155 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 LPCAT4Q643R3 524 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 Q6ZSR9 355 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 LRRC70Q7Z2Q7 622 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 DHFR2Q86XF0 187 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 AQP12AQ8IXF9 295 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 TRAM1L1Q8N609 369 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 RNF148Q8N7C7 305 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 FNDC5Q8NAU1 212 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 CHST14Q8NCH0 376 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 OR2T11Q8NH01 316 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 FRS2Q8WU20 508 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 GATA6Q92908 595 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 ESAMQ96AP7 390 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 LRRC58Q96CX6 371 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 CCDC97Q96F63 343 aaPredicted RBP10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 MRGPRX3Q96LB0 322 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 SAMD11Q96NU1 681 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 MYCBPQ99417 103 aaPredicted RBP10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 TMEM79Q9BSE2 394 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 FAM83DQ9H4H8 585 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 NSUN3Q9H649 340 aaKnown RBP10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 ASIC5Q9NY37 505 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 MAP10Q9P2G4 905 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 GIMAP2Q9UG22 337 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 IL36AQ9UHA7 158 aa10.27□□□□□ -0.76
POLR2J3-201ENST00000379340 PIKFYVEQ9Y2I7 2098 aa10.27□□□□□ -0.77
POLR2J3-201ENST00000379340 BPTFQ12830 3046 aa10.27□□□□□ -0.77
POLR2J3-201ENST00000379340 MYOFQ9NZM1 2061 aa10.27□□□□□ -0.77
POLR2J3-201ENST00000379340 PRORSD1PA6NEY8 169 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 A6NHS1 94 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 CCDC154A6NI56 674 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 VGLL3A8MV65 326 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 A8MX80 341 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 H0YJX3 145 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 FXYD1O00168 92 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 PSMD11O00231 422 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 HOXC11O43248 304 aaPredicted RBP10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 DNAJA2O60884 412 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 STK16O75716 305 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 ADH1CP00326 375 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 FTH1P02794 183 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 HIST1H2AGP0C0S8 130 aaPredicted RBP10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 TCN1P20061 433 aaPredicted RBP10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 HIST1H2ADP20671 130 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 CYP2A7P20853 494 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 XPAP23025 273 aaPredicted RBP10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 SLC7A1P30825 629 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 MAPK9P45984 424 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 HNMTP50135 292 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 DIO3P55073 304 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 EEFSECP57772 596 aaKnown RBP10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 B4GALNT1Q00973 533 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 PRKG2Q13237 762 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 MED21Q13503 144 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 NFYCQ13952 458 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 NR6A1Q15406 480 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 PHKG1Q16816 387 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 GRAMD1BQ3KR37 738 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 SFT2D3Q587I9 215 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 C6orf10Q5SRN2 563 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 LAYNQ6UX15 382 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 DPPA4Q7L190 304 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 ZFAND4Q86XD8 727 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 DPP10Q8N608 796 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 DDHD1Q8NEL9 900 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 HIST1H2AHQ96KK5 128 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 ACOX2Q99424 681 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 HIST1H2AJQ99878 128 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 H2AFJQ9BTM1 129 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 ZSCAN5AQ9BUG6 496 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 SPATA16Q9BXB7 569 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 SLC12A9Q9BXP2 914 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 LINC00597Q9H2U6 94 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 SLC32A1Q9H598 525 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms